adbeggs

Pinned Repositories

• straglr

  Tandem repeat expansion detection or genotyping from long-read alignments

  Language:Python587479

• wf-human-variation

  Language:Nextflow941421442

• Spectre

  Copy number caller for long read data including SNV utilization

  Language:Python499293

• ClairS-TO

  ClairS-TO - a deep-learning method for tumor-only somatic variant calling

  Language:Python433133

• smrest

  Tumour-only somatic mutation calling using long reads

  Language:Rust22111

• readfish

  CLI tool for flexible and fast adaptive sampling on ONT sequencers

  Language:Python1681427232

• MultiQC

  Aggregate results from bioinformatics analyses across many samples into a single report.

  Language:JavaScript1.2k361.6k595

• dorado

  Oxford Nanopore's Basecaller

  Language:C++4813299259

• cpsr

  Cancer Predisposition Sequencing Reporter (CPSR)

  Language:R5674012

• arriba

  Fast and accurate gene fusion detection from RNA-Seq data

  Language:C++2251424350

adbeggs's Repositories