alesssia/YAMP

Issues

• Error: `Missing process or function` when running the pipeline

  #29 opened 4 months ago by jacodela
  2

• How can I split clean reads into R1 and R2 files

  #28 opened 6 months ago by jehaab
  0

• Something missing in singularity container

  #25 opened 2 years ago by mfreidin1975
  1

• Error running on test data

  #20 opened 3 years ago by Rhinogradentia
  16

• ERROR PULLING DOCKER UNIREF DATABASES

  #27 opened 2 years ago by EorgeKit
  1

• Failed to pull singularity image

  #26 opened 2 years ago by fredrickkebaso
  0

• ChocoPhlAn and UniRef databases for HUMAnN

  #24 opened 2 years ago by diptarajchaudhari
  2

• humann not in the biobaker container

  #23 opened 3 years ago by poquirion
  3

• Error on Real Dataset

  #22 opened 3 years ago by ParsaGhadermazi
  0

• Error on running test

  #21 opened 3 years ago by ParsaGhadermazi
  14

• YAMP test fails on fresh install — Ubuntu 20

  #17 opened 3 years ago by gui11aume
  9

• Missing assets

  #18 opened 3 years ago by gui11aume
  3

• Dockerfile with Miniconda3 (Python3)

  #11 opened 3 years ago by junaruga
  3

• Error executing process > 'dedup' with message Command output empty

  #16 opened 4 years ago by ramakrishnas
  1

• SGE cluster queue specification

  #15 opened 4 years ago by CRichard21
  2

• alphaDiversity process does not find null file and fails in AWS batch

  #14 opened 5 years ago by gilfreund
  8

• Question on bbduk command usage

  #13 opened 5 years ago by tamuanand
  3

• Can I run YAMP locally?

  #12 opened 5 years ago by biofuture
  5

• BowTie2 database file for MetaPhlAn2

  #8 opened 6 years ago by kviljoen
  2

• error when running on my Mac

  #9 opened 6 years ago by edxxgardo
  0

• docker run fail for demo data

  #7 opened 6 years ago by wangdatou2009
  7

• some documentation suggestions

  #6 opened 7 years ago by will-rowe
  7

• Deduplication

  #5 opened 7 years ago by SilasK
  3

• memory limit

  #4 opened 7 years ago by SilasK
  1

• Documentation updates

  #3 opened 7 years ago by richardjdavies
  1

• running yamp with docker

  #1 opened 7 years ago by sbastkowski
  1