Pinned Repositories
pySCENIC
pySCENIC is a lightning-fast python implementation of the SCENIC pipeline (Single-Cell rEgulatory Network Inference and Clustering) which enables biologists to infer transcription factors, gene regulatory networks and cell types from single-cell RNA-seq data.
ABRS
ColorMIP_Mask_Search
ColorMIP_Mask_Search plugin for Fiji
connectome-python
FANC_auto_recon
Code for processing and analyzing the automated reconstruction of the Lee lab's Female Adult Nerve Cord EM dataset
fancr
Support Acccess to the Female Adult Nerve Cord (FANC) Dataset
workshop-shell-scripts
CellChat
R toolkit for inference, visualization and analysis of cell-cell communication from single-cell and spatially resolved transcriptomics
CellChat
R toolkit for inference, visualization and analysis of cell-cell communication from single-cell data
amberqiong's Repositories
amberqiong/ABRS
amberqiong/ColorMIP_Mask_Search
ColorMIP_Mask_Search plugin for Fiji
amberqiong/connectome-python
amberqiong/FANC_auto_recon
Code for processing and analyzing the automated reconstruction of the Lee lab's Female Adult Nerve Cord EM dataset
amberqiong/fancr
Support Acccess to the Female Adult Nerve Cord (FANC) Dataset
amberqiong/workshop-shell-scripts