Pinned Repositories
bagls
A neural network trained on the BAGLS benchmark dataset
CodingAlongEvening
This is everything we do in the Codig Along Evening sessions.
GenericGUI
A generic graphical user interface (GUI) in Python, based on PyQt, numpy and pyqtgraph
ImagesAreExcelSheets
This repository contains a Jupyter notebook that converts a given image to an Excel file.
lazyparallel
A class to easily run a function in parallel with runtime estimation
lossless
Saves videos or stacks lossless using different methods
MovieMaker
Creates movies using FFMPEG from Matplotlib plots or custom images
nutil
Lazy functions for Jupyter notebooks
pipra
Pixel-Precise Annotator
stytra
A modular package to control stimulation and track behaviour
anki-xyz's Repositories
anki-xyz/pipra
Pixel-Precise Annotator
anki-xyz/bagls
A neural network trained on the BAGLS benchmark dataset
anki-xyz/MovieMaker
Creates movies using FFMPEG from Matplotlib plots or custom images
anki-xyz/GenericGUI
A generic graphical user interface (GUI) in Python, based on PyQt, numpy and pyqtgraph
anki-xyz/ImagesAreExcelSheets
This repository contains a Jupyter notebook that converts a given image to an Excel file.
anki-xyz/nutil
Lazy functions for Jupyter notebooks
anki-xyz/CodingAlongEvening
This is everything we do in the Codig Along Evening sessions.
anki-xyz/drawing3d
Functions to draw features in a 3D stack
anki-xyz/edgetpu
Deep Learning on Edge TPUs
anki-xyz/GlottalMidline
anki-xyz/lif_reader
Reads LIF files (Leica Imaging File Format) and converts it to an hdf5 container file.
anki-xyz/lossless
Saves videos or stacks lossless using different methods
anki-xyz/lazyparallel
A class to easily run a function in parallel with runtime estimation
anki-xyz/ANTsPy
Advanced Normalization Tools in Python
anki-xyz/bagls_roi
Rectangular ROI selection for the BAGLS dataset
anki-xyz/DSSS
Data Science Survival Skills examples
anki-xyz/flammkuchen
Flexible HDF5 saving/loading library forked from deepdish (University of Chicago) and maintained by the Portugues lab
anki-xyz/openhsv
OpenHSV - Endoscopy and Analysis Software
anki-xyz/pac
This is a test repository for `pac`
anki-xyz/pipraPaper
anki-xyz/roifile
Read and write ImageJ ROI format. Forked from https://pypi.org/project/roifile
anki-xyz/scikit-image
Image processing in Python
anki-xyz/seaborn
Statistical data visualization using matplotlib
anki-xyz/segmentation_models
Segmentation models with pretrained backbones. Keras.
anki-xyz/survival2019
Python Survival Skill Course 2019
anki-xyz/survival2022
This is where the stuff goes today
anki-xyz/survival_2020
Everything I will do today I will provide here in this repository
anki-xyz/survival_2021
This is the repository where I put everything I program today
anki-xyz/zebrafish_nn
Testing neural networks to find features in larval zebrafish, such as the head, the tail tip and the tail base.