appliedbinf/el_gato

Issues

• isPcr check failing when running in a container due to grep -P

  #22 opened 22 days ago by DarianHole
  2

• 1.20.0 to bioconda?

  #21 opened 3 months ago by russellsmithies
  2

• pilE allele not found in some isolates

  #19 opened 4 months ago by HilaryESR
  7

• Possible database update needed

  #20 opened 4 months ago by vascokarla
  3

• Differences in read vs. assembly-based results

  #18 opened 4 months ago by amilesj
  4

• No flaA gene in blast results in version 1.18.0

  #17 opened 5 months ago by Kincekara
  2

• Database update

  #16 opened 6 months ago by EricFournier3
  2

• incorrect designation

  #14 opened 6 months ago by rediattewolde
  4

• ValueError

  #15 opened 6 months ago by rediattewolde
  2

• IndexError: list index out of range

  #13 opened a year ago by himamura2
  3

• --assembly option does not work

  #12 opened a year ago by Kincekara
  1

• wrong version information in release 1.15.0

  #11 opened a year ago by Kincekara
  2

• versioning

  #7 opened a year ago by Kincekara
  1

• Bioconda Release

  #6 opened a year ago by rpetit3
  2

• Lines repeated in the MLST report

  #4 opened 2 years ago by tbazilegith
  2

• Output directory 'output2019_mlst' exists and overwrite is turned off. Exiting

  #3 opened 2 years ago by tbazilegith
  2

• Found conflicts! Looking for incompatible packages

  #2 opened 2 years ago by tbazilegith
  7