Add `SNPs.merge` method
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apriha commented
To simplify merging SNPs, add a merge
method to the SNPs
class, and in the process obsolete the SNPsCollection
class. The merge method should accept an iterable of SNPs
objects. In this manner, SNPs
objects can be merged after the fact, vs. requiring a SNPsCollection
from the beginning to merge SNPs.
Similar functionality to SNPsCollection
should be provided, such as sorting SNPs after the merge and identifying discrepant genotypes and positions.
Properties of the SNPs
objects will need to be merged and behavior defined (e.g., source
, build
, discrepant_XY_snps
, etc.).