asl/BandageNG

Issues

• Invalid path missing segment orientation causes crash upon loading graph

  #166 opened 14 days ago by ASLeonard
  0

• Error loading .gfa file in BandageNG - "Malformed path string for path 'EU305676.1'"

  #164 opened a month ago by florenmartino
  3

• Save vertical space on showing number of paths / walks on the same line

  #163 opened 2 months ago by asl
  0

• Show paths / walks on load

  #160 opened 2 months ago by asl
  0

• Ensure proper range for depth range

  #161 opened 2 months ago by asl
  0

• Paths not found in bandageNG

  #159 opened 3 months ago by Ecoulembier
  3

• Refactor error handling

  #98 opened 2 years ago by asl
  1

• Develop UI for links

  #158 opened 4 months ago by asl
  1

• Connected components?

  #115 opened 2 years ago by tnn111
  10

• Bandage-NG on Windows?

  #151 opened 4 months ago by Ecoulembier
  3

• segmentation fault on branch walks

  #150 opened 4 months ago by dirkjanvw
  8

• Let BandageNG parse W-lines from GFA v1.1?

  #149 opened 4 months ago by dirkjanvw
  7

• Add paths and walks for `--scope` CLI option

  #152 opened 4 months ago by asl
  0

• Using `BandageNG layout` is `Linear graph layout` turn `On` or `Off` by default?

  #148 opened 10 months ago by subwaystation
  4

• Adding depth data to a graph

  #146 opened 10 months ago by Adamtaranto
  6

• Bandage cannot find BLAST

  #147 opened a year ago by Adamtaranto
  2

• Path hits interrupt rainbow colouring of nodes

  #144 opened a year ago by ASLeonard
  0

• Support for nodes larger than 2^27

  #143 opened a year ago by diego-rt
  6

• De-select all button for "shown" queries

  #142 opened a year ago by danydoerr
  0

• difference between tblastn in gui and command line

  #138 opened a year ago by yjk-bertrand
  6

• blast tsv does not include query start and end coordinates

  #139 opened a year ago by yjk-bertrand
  0

• Load layout via command line?

  #137 opened a year ago by lindayqlin
  2

• bandage image

  #133 opened a year ago by xhlin321
  10

• Self-loop not drawn

  #134 opened a year ago by maickrau
  1

• coverage question

  #132 opened 2 years ago by svedwards
  1

• Colors not updated after new csv loaded

  #131 opened 2 years ago by Dmitry-Antipov
  2

• Please add an option to write the layout to a file

  #127 opened 2 years ago by subwaystation
  10

• Incorrect data loaded from CSV file

  #122 opened 2 years ago by rlorigro
  4

• Perpetual loading bar on small GFA

  #121 opened 2 years ago by rlorigro
  4

• Node has negative length

  #116 opened 2 years ago by rlorigro
  7

• A specific GFA won't open

  #119 opened 2 years ago by RolandFaure
  4

• confusing

  #120 opened 2 years ago by kingforest93
  6

• Qt and CMake related issues

  #118 opened 2 years ago by Overcraft90
  9

• Generalize / refactor BLAST hits to allow other tools

  #77 opened 2 years ago by asl
  1

• Centralize style handling

  #105 opened 2 years ago by asl
  0

• Complilation error

  #110 opened 2 years ago by microfuge
  3

• Provide better UI for paths

  #85 opened 2 years ago by asl
  8

• Loading queries for BLAST is quadratic in sequence count

  #101 opened 2 years ago by asl
  0

• Failed to run CLI from MacOS app bundle

  #99 opened 2 years ago by asl
  4

• Strange layout of components

  #93 opened 2 years ago by asl
  5

• Stack overflow in graph walking

  #79 opened 2 years ago by asl
  0

• Refactor edge storage

  #94 opened 2 years ago by asl
  0

• Crashes immediately during layout

  #91 opened 2 years ago by rlorigro
  35

• Can't load pggb output?

  #90 opened 2 years ago by yuliamostovoy
  7

• [RFC] Load graphs and paths in 'vg' format

  #89 opened 2 years ago by asl
  2

• Write GFA paths

  #74 opened 2 years ago by asl
  0

• Ensure that custom colors / labels are properly saved to and reloaded from GFA

  #75 opened 2 years ago by asl
  0

• Preserve custom tags

  #76 opened 2 years ago by asl
  0

• Multiple selection from CSV input?

  #80 opened 2 years ago by ochkalova
  0

• Revamp the documentation

  #78 opened 2 years ago by asl
  2