diego-rt

Pinned Repositories

hifiasm
Hifiasm: a haplotype-resolved assembler for accurate Hifi reads
Language:C++529 27 65086
cactus
Official home of genome aligner based upon notion of Cactus graphs
Language:C505 22 841111
Rsamtools-csi
Binary alignment (BAM), FASTA, variant call (BCF), and tabix file import
Language:R0 0 00
igv
Integrative Genomics Viewer. Fast, efficient, scalable visualization tool for genomics data and annotations
Language:Java636 48 1.2k381
MACS
MACS -- Model-based Analysis of ChIP-Seq
Language:Cython699 49 526268
cutadapt
Cutadapt removes adapter sequences from sequencing reads
Language:Python513 23 723129
Flye
De novo assembler for single molecule sequencing reads using repeat graphs
Language:C767 28 689165
dorado
Oxford Nanopore's Basecaller
Language:C++491 32 1k59
seqkit
A cross-platform and ultrafast toolkit for FASTA/Q file manipulation
Language:Go1.3k 29 433157
signac
R toolkit for the analysis of single-cell chromatin data
Language:R321 6 1.2k86

diego-rt/Rsamtools-csi
Binary alignment (BAM), FASTA, variant call (BCF), and tabix file import
Language:R0 0 00