diego-rt

Pinned Repositories

hifiasm
Hifiasm: a haplotype-resolved assembler for accurate Hifi reads
Language:C++561 30 69188
cactus
Official home of genome aligner based upon notion of Cactus graphs
Language:C533 22 892111
Rsamtools-csi
Binary alignment (BAM), FASTA, variant call (BCF), and tabix file import
Language:R0 0 00
igv
Integrative Genomics Viewer. Fast, efficient, scalable visualization tool for genomics data and annotations
Language:Java649 48 1.3k387
MACS
MACS -- Model-based Analysis of ChIP-Seq
Language:Python717 48 541269
cutadapt
Cutadapt removes adapter sequences from sequencing reads
Language:Python528 24 734132
Flye
De novo assembler for single molecule sequencing reads using repeat graphs
Language:C797 30 701169
dorado
Oxford Nanopore's Basecaller
Language:C++560 31 1.2k68
seqkit
A cross-platform and ultrafast toolkit for FASTA/Q file manipulation
Language:Go1.3k 29 442160
signac
R toolkit for the analysis of single-cell chromatin data
Language:R341 6 1.2k90

diego-rt/Rsamtools-csi
Binary alignment (BAM), FASTA, variant call (BCF), and tabix file import
Language:R0 0 00