Pinned Repositories
awesome-janelia-software
A curated list of awesome Janelia software
bigdataviewer-playground
bigdataviewer-render-app
On the fly 3D visualization of render database stacks
bigdataviewer-vistools
Helpers to use BigDataViewer as a quick visualization tool in other projects.
experiments
Immature experimental stuff
fiji-scripts
A wild collection of useful and partially broken scripts for Fiji and TrakEM2
imagej-tensorflow
ImageJ/TensorFlow integration library.
ImgLib2Access
An ImgLib2 extension of Sage and Unser's (2001) ImageAccess. A simplification layer for teaching image processing.
mpicbg
Fiji module for image transformation and related algorithms
axtimwalde's Repositories
axtimwalde/mpicbg
Fiji module for image transformation and related algorithms
axtimwalde/ImgLib2Access
An ImgLib2 extension of Sage and Unser's (2001) ImageAccess. A simplification layer for teaching image processing.
axtimwalde/fiji-scripts
A wild collection of useful and partially broken scripts for Fiji and TrakEM2
axtimwalde/awesome-janelia-software
A curated list of awesome Janelia software
axtimwalde/bigdataviewer-playground
axtimwalde/bigdataviewer-render-app
On the fly 3D visualization of render database stacks
axtimwalde/bigdataviewer-vistools
Helpers to use BigDataViewer as a quick visualization tool in other projects.
axtimwalde/experiments
Immature experimental stuff
axtimwalde/imagej-tensorflow
ImageJ/TensorFlow integration library.
axtimwalde/imglib2-remote-viewer
axtimwalde/mastodon
Mastodon – a large-scale tracking and track-editing framework for large, multi-view images.
axtimwalde/mobie-io
axtimwalde/model-runner-java
axtimwalde/parallel-elastic-alignment
A script collection and workflow description to parallelize elastic alignment with TrakEM2 on a cluster
axtimwalde/PredictorOp
axtimwalde/quarto-test
minimal working example
axtimwalde/SAM_service
web service to supply segment_anything models, when provided with an image
axtimwalde/sketchbooks
axtimwalde/volume-renderer
Primitive ImgLib2 volume renderer