barantin

barantin's Stars

• LarsonLab/UTEMRI_Brain

  Processing ultrashort echo time (UTE) MRI data in the Brain

  Language:Jupyter Notebook85

• JihunKwon/MyImagingLab_T2map_dicom-master

  Language:Matlab2

• HelingZ7/MyImagingLab_T2map_dicom

  MyImagingLab_T2map is part of my matlab codebase at UTSW for analysis of MRI data.

  Language:Matlab3

• mrfil/lesion-mapper

  Automated mapping of T2 white matter hyperintensities using FSL

  Language:Shell73

• markdoes/MERA

  Multi Exponential Relaxation Analysis toolbox for MATLAB

  Language:Matlab152

• AAAArcus/multiT2

  MATLAB code for multi-component T2 estimation, together with performance evaluating scripts.

  Language:Matlab32

• martin3141/spant

  Tools for reading, visualising and processing Magnetic Resonance Spectroscopy data

  Language:R236

• CoBrALab/documentation

  Documentation for every thing, everything documented

  416

• chenkonturek/MRS_MRI_libs

  Contains libraries for reading, writing and analysing Magnetic Resonance Spectroscopy and Imaging (MRS & MRI) data.

  Language:Matlab3621

• vsevans/CEST

  Codes and materials for CEST MRI data analysis

  Language:MATLAB42

• JCardenasRdz/CESTMRI.mat

  CESTMRI.mat is a MATLAB library for the simulation and analysis of CEST MRI data

  Language:Matlab51

• pganssle/pyCEST

  A python library for handling CEST MRI data

  Language:Python4

• cest-sources/multiB1_fit_Z-cw_2pool

  Quantification of CEST effects by simultaneous fit of Z-spectra acquired at multiple B1

  Language:Matlab15

• cest-sources/CEST_EVAL

  Language:MATLAB108

• cran/spant

  :exclamation: This is a read-only mirror of the CRAN R package repository. spant — MR Spectroscopy Analysis Tools. Homepage: https://martin3141.github.io/spant/, https://github.com/martin3141/spant/ Report bugs for this package: https://github.com/martin3141/spant/issues/

  Language:R1

• rhancockn/mrs_voxel_positioning

  Voxel positioning for magnetic resonance spectroscopy (MRS).

  Language:Shell3

• DrMichaelLindner/MRSParVolCo

  Partial Volume Correction for 3T MR spectroscopy

  Language:MATLAB2

• SIVICLab/sivic

  SIVIC is an open-source, standards-based software framework and application suite for processing and visualizing DICOM MR Spectroscopy data. Through the use of DICOM, SIVIC aims to facilitate the application of MRS in medical imaging studies. The SIVIC code repository lives on github but our user portal is on sourceforge.

  Language:C++2913

• luisibanez/MRSpectroscopySegmentation

  Image segmentation of MR spectroscopy data

  Language:C++21

• gina-belmonte/SlicerExtension-QASuite

  Suite of utilities for quality controls in CT or MRI - Slicer 3D Extension

  Language:Python1

• trendscenter/coinstac_mriqc_computation

  This computation run mriqc tool on smri, fmri bids datasets to create quality control visual reports, which helps to identify outlier subjects in the data.

  1

• cat2tom/autoMRIRadiomics

  a matlab package for extracting MRI radiomics feature from a phantom used for daily quality control of a MRI scanner.

  21

• vfonov/deep-qc

  Deep learning for MRI registration quality control

  Language:Python83

• albertoduina/ControlliMensili

  Automatic / Manual MRI quality control images with ImageJ

  Language:Java1

• Qoala-T/QC

  Qoala-T is a supervised-learning tool for quality control of FreeSurfer segmented MRI data

  Language:R7215

• nipreps/mriqc

  Automated Quality Control and visual reports for Quality Assessment of structural (T1w, T2w) and functional MRI of the brain

  Language:Python294130

• CIC-methods/FID-A

  Toolbox for simulation and processing of in-vivo magnetic resonance spectroscopy (MRS) data

  Language:MATLAB8072

• wy2lee/LCM_tools

  Python based tools for automated processing of Siemens MRS data using lcmodel

  Language:Python1

• CVNRneuroimaging/proj.bc.gabaTraining

  training and testing: GABA MRS with MEGA-PRESS and LCModel

  1

• OXSAtoolbox/OXSA

  Toolbox for developing pipelines for analysis of spectroscopy data. Includes code for loading Siemens spectroscopy data, and for spectral fitting/analysis.

  Language:MATLAB224