Pinned Repositories
BrainNet-ML-ToolBox
Python Machine Learning Toolbox for Brain Network Classification. Source codes are included of the top 20 teams in the Kaggle competition.
DGL
Deep Graph-Based Learning Course (ICL, Computing)
DGN
How to fuse a population of graphs into a single one using graph neural networks?
GNNs-in-Network-Neuroscience
A review of papers proposing novel GNN methods with application to brain connectivity published in 2017-2020.
NEURAL
Attention-Guided Pruning for Unified Multimodal Resource-Constrained Clinical Evaluation
RegGNN
Regression Graph Neural Network (regGNN) for cognitive score prediction.
survey-multigraph-integration-methods
Comparative survey of multigraph integration methods
uGNN
Unified Learning (on any architecture) using GNNs
X-Node
Self Explanation is All We Need — GNN nodes which self-explain!
Journal-Club
The RISE Journal Club aims to create a friendly environment to discuss the latest state-of-the-art papers in the areas of medical image analysis, AI and computer vision. The moderators will briefly introduce the paper and then moderate a discussion where everyone is welcome to provide their thoughts and ask any questions on the paper.
basiralab's Repositories
basiralab/GNNs-in-Network-Neuroscience
A review of papers proposing novel GNN methods with application to brain connectivity published in 2017-2020.
basiralab/MGN-Net
MGN-Net: A novel Graph Neural Network for integrating heterogenous graph population derived from multiple sources.
basiralab/MultigraphGNet
Predicting multigraph brain population from a single graph
basiralab/reproducibleFedGNN
Investigating the reproducibility of federated GNN models
basiralab/RG-Select
Quantifying the Reproducibility of Graph Neural Networks using Multigraph Brain Data
basiralab/Kaggle-BrainNetPrediction-Toolbox
A Python toolbox for predicting brain network (graph) evolution over time from a single observation. The codes of the 20 competing Kaggle teams along with the competition datasets are made available.
basiralab/Meta-RegGNN
Meta-learning using graph neural networks for brain connectivity regression.
basiralab/predUncertaintywithDomainShift
How to predict uncertainty of regression GNN models under target domain shifts?
basiralab/topoGAN
Multigraph generation from a source graph.
basiralab/4D-FED-GNN
Federated time-dependent graph evolution prediction with missing timepoints.
basiralab/ReMI-Net-Star
Recurrent multigraph neural network
basiralab/Dual-HINet
Modularity-based graph population integration
basiralab/GRN
Graph registration network using representative templates
basiralab/ipyvizzu
Build animated charts in Jupyter Notebook and in many other environments with a simple Python syntax.
basiralab/leaf
Leaf: A Benchmark for Federated Settings
basiralab/python-data-visualization
Python Data Visualization course code and examples
basiralab/2019_CNI_TrainingRelease
Training data release for Connectomics in NeuroImaging - Transfer Learning Challenge (CNI-TLC). For more details, see http://miccai.brainconnectivity.net
basiralab/alphatensor
basiralab/AugmentatorNet
basiralab/Awesome-Dataset-Distillation
Awesome Dataset Distillation Papers
basiralab/BrainSpace
BrainSpace is an open-access toolbox that allows for the identification and analysis of gradients from neuroimaging and connectomics datasets | available in both Python and Matlab |
basiralab/conp-dataset
:open_file_folder: A DataLad dataset for CONP
basiralab/ddrm
[NeurIPS 2022] Denoising Diffusion Restoration Models -- Official Code Repository
basiralab/GaNDLF
A generalizable application framework for segmentation, regression, and classification using PyTorch
basiralab/gbm-data-longitudinal
This repository contains code used to prepare the LUMIERE Glioblastoma dataset.
basiralab/Graph-Neural-Networks-in-Life-Sciences
basiralab/M2LschoolTutorials2022
The M2L school 2022 tutorials
basiralab/multimodalConnectomeGeneration
micapipe from the Multimodal imaging and connectome analysis lab (http://mica-mni.github.io) at the Montreal Neurological Institute. Read The Docs documentation below
basiralab/optuna
A hyperparameter optimization framework
basiralab/uncertainty-toolbox
Uncertainty Toolbox: a python toolbox for predictive uncertainty quantification, calibration, metrics, and visualization