bcgsc/pori_graphkb_loader

Issues

• error with load_civic

  #151 opened 8 months ago by wx115
  0

• FDA SRS UNII download links no longer scriptable

  #61 opened 3 years ago by creisle
  1

• Add HPO loader

  #80 opened 3 years ago by creisle
  1

• Update CIViC loader for multi-variant Molecular Profiles

  #110 opened a year ago by cgrisdale
  3

• Issue with json-cycle package

  #124 opened a year ago by creisle
  3

• Sync revised fields of CIViC EIDs that were previously loaded

  #121 opened 2 years ago by cgrisdale
  1

• Support new CIViC Evidence Item type

  #5 opened 2 years ago by creisle
  1

• Update CIViC API link in README.md

  #108 opened 2 years ago by mathieulemieux
  1

• Modify MOA loader so that mutation signature versions are not in the variant name

  #111 opened 2 years ago by cgrisdale
  0

• Write Test for Ensembl Protein Loader

  #29 opened 2 years ago by creisle
  1

• MOA therapeutic associated germline mutations being loaded as pathogenic statements

  #103 opened 3 years ago by cgrisdale
  0

• Error on CIViC cron job on Bamboo - evidenceItems status type

  #99 opened 3 years ago by mathieulemieux
  1

• Loading ChEMBL data

  #85 opened 3 years ago by ninaxiong11
  1

• Update CIViC loader to v2 API

  #88 opened 3 years ago by creisle
  4

• Create disease ontology json file

  #79 opened 3 years ago by creisle
  3

• demonstrate using node-fetch to get query data via civic v2 graphql

  #92 opened 3 years ago by creisle
  0

• create table mapping response body name changes in civic v2 api

  #93 opened 3 years ago by creisle
  1

• error about snakemake

  #70 opened 3 years ago by yoshihiko1218
  12

• Investigate MONDO ontology

  #82 opened 3 years ago by creisle
  0

• Support new Fusion notation recommendations

  #76 opened 3 years ago by creisle
  2

• Add "Getting Started" docs for new developers

  #36 opened 3 years ago by creisle
  0

• Move to node 16

  #35 opened 3 years ago by creisle
  1

• Investigate loading NCIt terms as needed using API

  #78 opened 3 years ago by creisle
  0

• Add tests for GraphKB Module Helper Methods

  #39 opened 3 years ago by creisle
  3

• Write unit tests for NCIt helper methods

  #30 opened 3 years ago by creisle
  0

• Load CIViC evidence with clinical significance of Unaltered Function

  #59 opened 3 years ago by cgrisdale
  0

• Write loader for Molecular Oncology Almanac knowledgebase

  #38 opened 3 years ago by cgrisdale
  4

• Support loading CIViC variant EGFR vIII

  #60 opened 3 years ago by cgrisdale
  0

• Create diagrams of relevance term mappings between CIViC and graphkb

  #24 opened 3 years ago by cgrisdale
  0

• CIViC Resistance Does not Support

  #19 opened 3 years ago by creisle
  0

• Support sync of deleted entries from CIViC

  #20 opened 3 years ago by creisle
  0

• Block importing of CIViC Does not support terms that don't have matching Relevance term

  #25 opened 3 years ago by cgrisdale
  1

• Add support for importing CIViC evidence with evidence direction "does not support sensitivity"

  #9 opened 3 years ago by cgrisdale
  1

• Support new CIViC fusion variant naming convention

  #14 opened 3 years ago by cgrisdale
  0