beliveau-lab/PaintSHOP_pipeline

Issues

• pipeline conda env breaks without NUPACK conda package available

  #18 opened 8 months ago by conorcamplisson
  0

• Obtain training data set

  #17 opened 9 months ago by ilead-cong
  0

• Example pipeline fails: error in rule predict_duplex

  #16 opened a year ago by hyphal-domenico
  1

• Temperature limitations?

  #15 opened a year ago by Marinela-os
  5

• Problem in probe alignment when running the pipeline using a different probe length range

  #14 opened 2 years ago by JasonJHughes
  1

• update filter_n_probes rule to also drop seq candidates with '-'

  #11 opened 2 years ago by conorcamplisson
  0

• similar and complementary sequences

  #9 opened 3 years ago by jonathanperrie
  5

• xgb pickled model assumptions

  #8 opened 3 years ago by jonathanperrie
  1

• Incorrect primer when using barcodes?

  #7 opened 3 years ago by dpshepherd
  1

• ensure probe_strand value is updated to reflect strand inversions

  #4 opened 4 years ago by conorcamplisson
  0