Pinned Repositories
OligoMiner
Genome-scale design tool for oligo hybridization probes
PaintSHOP_pipeline
A scalable machine learning pipeline for probe specificity prediction.
GS540_snakemake_demo
Example Snakemake pipeline for the Genome 540 course at UW Genome Sciences
heroku-buildpack-conda
oligo_miner_env
A conda environment for running OligoMiner
probe_design_demo
py_idt
A python interface for creating IDT bulk oligo order forms in Excel.
rosalind_workbook
Jupyter notebook templates for the bioinformatics problems on rosalind.info and a corresponding conda environment
SimFISH_frontend
Front-end web interface for SimFISH app implemented with React & Shiny
yevo_pipeline
Variant calling Snakemake pipeline for yEvo sequencing data https://yevo.org
conorcamplisson's Repositories
conorcamplisson/py_idt
A python interface for creating IDT bulk oligo order forms in Excel.
conorcamplisson/GS540_snakemake_demo
Example Snakemake pipeline for the Genome 540 course at UW Genome Sciences
conorcamplisson/heroku-buildpack-conda
conorcamplisson/oligo_miner_env
A conda environment for running OligoMiner
conorcamplisson/probe_design_demo
conorcamplisson/rosalind_workbook
Jupyter notebook templates for the bioinformatics problems on rosalind.info and a corresponding conda environment
conorcamplisson/SimFISH_frontend
Front-end web interface for SimFISH app implemented with React & Shiny