bgruening/docker-galaxy

Issues

• Purging users and old non-deleted data.

  #615 opened a month ago by jtdbod
  2

• repair the website

  #610 opened 2 months ago by bgruening
  1

• Checking /export... OSError Invalid cross-device link: '/tool_deps' -> '/export/tool_deps'

  #579 opened 2 months ago by JoelPHoward
  1

• Labels

  #566 opened 2 months ago by fabianomenegidio
  1

• Create a docker image from a running container

  #538 opened 2 months ago by mohan-XD
  1

• ideas for a new 24.x version

  #609 opened 2 months ago by bgruening
  7

• error in attmap setup command: use_2to3 is invalid

  #585 opened 2 months ago by gad83
  3

• Database problems with startup and startup_lite

  #562 opened 2 months ago by bedroesb
  19

• Virtualenv failing

  #516 opened 2 months ago by innovate-invent
  1

• metadata detection for biom1 went wrong

  #518 opened 2 months ago by vebaev
  1

• Configure postgres to make incremental backups by default

  #532 opened 5 years ago by chambm
  2

• wrong permissions on /galaxy/upload_store

  #522 opened 2 months ago by tdudgeon
  1

• Unresolved paths to some images, e.g `static/style/blue/ok_small.png`

  #552 opened 2 months ago by fgp
  1

• File upload not working

  #544 opened 2 months ago by VangelisTheodorakis
  1

• About can't use reference genome in docker.

  #548 opened 2 months ago by jackycsie
  1

• Pre-installing tools in the tool_conf via conda

  #584 opened 2 months ago by ebolyen
  1

• Brewing flavors - tools installing but not seen in tool panel.

  #570 opened 2 months ago by MoHeydarian-MS
  1

• Unstable running of standalone galaxy setup as Azure App Service

  #591 opened 2 months ago by kdudani-tibco
  1

• 403/Forbidden and "Could not open job state file"

  #571 opened 2 months ago by marco-brandizi
  7

• Docker-galaxy doesn't work

  #583 opened 2 months ago by deoliveiralf
  3

• Dontainer not starting after copying

  #592 opened 2 months ago by cass436
  1

• Docker images later than 19.09 fail to initialize/migrate database without modification (with workaround(s))

  #575 opened 2 months ago by pmpcosta
  11

• Docker galaxy cannot be installed and started correctly

  #587 opened 2 months ago by shenweiyan
  9

• python 3.8 and futures 3.1.1 not working well together

  #588 opened 2 months ago by gad83
  8

• run task failure: Error in lock(.sql_lock_path(dbfile), exclusive = exclusive) : Cannot open lock file: Permission denied

  #606 opened 2 months ago by mega-bisharp
  1

• Custom welcome.html is not displaying?

  #594 opened 2 months ago by ZimmerA
  1

• Production use?

  #599 opened 2 months ago by meowcat
  1

• Fix for start failure

  #597 opened 2 months ago by benjaminbrumbaugh
  1

• Can't download file from urls

  #602 opened 2 months ago by H1207953831
  1

• ERROR: Process docker: no such file

  #605 opened 2 months ago by potant
  1

• unable to start container

  #604 opened 2 months ago by GuilhemSempere
  1

• can't load the welcome.html

  #603 opened 7 months ago by LinsenHou
  1

• Galaxy 22.05 updates

  #601 opened 2 years ago by ebolyen
  1

• 403 Forbidden nginx/1.14.0 (Ubuntu)

  #595 opened 2 years ago by chatofking
  1

• consider to integrate and use Dokter

  #598 opened 2 years ago by bgruening
  0

• Docker container runs out of space if /export is used

  #593 opened 3 years ago by eghasemy
  0

• PSA: Yarn repo key update causes apt-get update to fail in images derived from docker-galaxy-stable

  #578 opened 4 years ago by fubar2
  0

• WIP. In compose: Add a galaxy-post-configurator server to add specifics of a flavour

  #582 opened 4 years ago by fubar2
  1

• Error installing tools

  #564 opened 4 years ago by fabianomenegidio
  2

• Ephemeris not available during Docker build in 19.09

  #551 opened 4 years ago by bedroesb
  1

• blastn: error while loading shared libraries: libidn.so.11

  #541 opened 5 years ago by dfornika
  1

• Galaxy postgresql password

  #543 opened 5 years ago by likku3
  2

• Error in ./build-orchestration-images.sh --no-push --condor --grafana --slurm --k8s

  #542 opened 5 years ago by iuctf
  0

• bug report: when using docker swarm build galaxy, we can't upload file.

  #537 opened 5 years ago by lizhi16
  1

• Docs for upgrading postrgres don't work

  #527 opened 5 years ago by tdudgeon
  6

• Container can't be built

  #526 opened 5 years ago by dpryan79
  1

• why admin user is created in Dockerfile?

  #521 opened 5 years ago by osallou
  1

• ERROR: Couldn't find env file: /home/docker-galaxy-stable/compose/.env

  #519 opened 5 years ago by lizhi16
  0

• Changes to config of nginx and supervisor are not persisted

  #513 opened 6 years ago by tdudgeon
  2

• Orchestrated+Fat Galaxy

  #515 opened 6 years ago by ThomasWollmann
  2