Try to run 'evaluate_deepgoplus.py' with cafa data

[asangphukieo]

I try to run 'evaluate_deepgoplus.py' with existing cafa model in data-cafa folder
I got this message

Error message:

Traceback (most recent call last):
File "evaluate_deepgoplus.py", line 257, in
main()
File "/home/asangphukieo/Documents/anaconda2/envs/deepgo/lib/python3.6/site-packages/click/core.py", line 764, in call
return self.main(*args, **kwargs)
File "/home/asangphukieo/Documents/anaconda2/envs/deepgo/lib/python3.6/site-packages/click/core.py", line 717, in main
rv = self.invoke(ctx)
File "/home/asangphukieo/Documents/anaconda2/envs/deepgo/lib/python3.6/site-packages/click/core.py", line 956, in invoke
return ctx.invoke(self.callback, **ctx.params)
File "/home/asangphukieo/Documents/anaconda2/envs/deepgo/lib/python3.6/site-packages/click/core.py", line 555, in invoke
return callback(*args, **kwargs)
File "evaluate_deepgoplus.py", line 115, in main
for j, score in enumerate(row.preds):
AttributeError: 'Pandas' object has no attribute 'preds'

Also, I can run cafa3_data.py and deepgoplus.py, but I cannot get prediction result from deepgoplus.py.

Thanks,
Apiwat

[coolmaksat]

Hi,
Thank you for reporting this.
I updated data-cafa.tar.gz file. Please download latest version which includes predictions.pkl file with prediction scores.
Alternatively, you can run python deepgoplus.py -ld. It will load trained model and generate predictions.pkl file

Let me know if you have any other questions.

[asangphukieo]

Thank you for prompt reply,

I run python deepgoplus.py with -ld option, but I got a new error,

Traceback (most recent call last):
File "deepgoplus.py", line 271, in
main()
File "/home/asangphukieo/Documents/anaconda2/envs/deepgo/lib/python3.6/site-packages/click/core.py", line 764, in call
return self.main(*args, **kwargs)
File "/home/asangphukieo/Documents/anaconda2/envs/deepgo/lib/python3.6/site-packages/click/core.py", line 717, in main
rv = self.invoke(ctx)
File "/home/asangphukieo/Documents/anaconda2/envs/deepgo/lib/python3.6/site-packages/click/core.py", line 956, in invoke
return ctx.invoke(self.callback, **ctx.params)
File "/home/asangphukieo/Documents/anaconda2/envs/deepgo/lib/python3.6/site-packages/click/core.py", line 555, in invoke
return callback(*args, **kwargs)
File "deepgoplus.py", line 155, in main
valid_generator.reset()
UnboundLocalError: local variable 'valid_generator' referenced before assignment