Bio-Ontology Research Group

Bio-Ontology Research Group at KAUST

Thuwal, Saudi Arabia

Pinned Repositories

deepgo
Function prediction using a deep ontology-aware classifier
Language:Python81 12 2824
deepgo2
Language:Python34 11 94
deepgoplus
DeepGO with GOPlus axioms
Language:Python90 16 3641
machine-learning-with-ontologies
Language:Jupyter Notebook127 21 231
mowl
mOWL: Machine Learning library with Ontologies
Language:Python63 17 324
multi-drug-embedding
Method for drug repurposing from knowledge graphs and literature
Language:Python33 21 412
ontology-tutorial
Ontology Tutorial
Language:Jupyter Notebook68 18 217
opa2vec
Turning Ontologies Plus Annotation Properties into Vectors
Language:Groovy35 19 1511
phenomenet-vp
A phenotype-based tool for variant prioritization in WES and WGS data
Language:Java37 8 1213
walking-rdf-and-owl
Feature learning over RDF data and OWL ontologies
Language:Python44 15 57

Bio-Ontology Research Group's Repositories

bio-ontology-research-group/Onto2Graph
Generating graph structures from OWL ontologies
Language:JavaScript12 4 01
bio-ontology-research-group/SMUDGE
SmuDGE: Semantic Disease Gene Embeddings
Language:Python12 14 13
bio-ontology-research-group/aberowl-orepo
AberOWL Ontology Repository
Language:JavaScript7 12 971
bio-ontology-research-group/OAEI2016
Ontology Alignment Evaluation Initiative 2016 Campaign
Language:Web Ontology Language3 4 02
bio-ontology-research-group/phenogocon
Method to predict phenotypes from functions
Language:Groovy3 9 01
bio-ontology-research-group/aberowl-meta
Install script and sub-directories for AberOWL
Language:Groovy2 16 81
bio-ontology-research-group/deepwalk
DeepWalk - Deep Learning for Graphs
Language:Python1 10 01
bio-ontology-research-group/ontology-and-phenotype-tutorial
Information the the tutorial on phenotypes
Language:TeX1 9 0
bio-ontology-research-group/pgsim
Similarity mesure analysis
Language:Python1 3 03
bio-ontology-research-group/phenomeweb
Language:Python1 12 01
bio-ontology-research-group/Random-walk-with-edge-stratification
Language:C++1 13 0
bio-ontology-research-group/Sparql2OWL
Language:Java1 9 0
bio-ontology-research-group/aberowl-obase
AberOWL Ontology Database
Language:Groovy11 0
bio-ontology-research-group/aberowl-sync
Ontology database sync component of orepo
Language:Groovy11 3
bio-ontology-research-group/blah4
Generating ontology class embeddings from PubMed abstracts
Language:Python1
bio-ontology-research-group/bowel
Language:Python
bio-ontology-research-group/deepro
Language:Python13 01
bio-ontology-research-group/eccb-tutorial
Materials for the ECCB Tutorial on learning with structured data
Language:TeX1
bio-ontology-research-group/elasticsearch-vector-scoring
Score documents with pure dot product / cosine similarity with ES
Language:Java
bio-ontology-research-group/fastOntoText
Learning ontology class representations in text
Language:HTML1
bio-ontology-research-group/fdi
Food-drug interaction identification
Language:Python
bio-ontology-research-group/func
FUNC: a package for detecting significant associations between gene sets and ontological annotations [MIRROR]
Language:C++
bio-ontology-research-group/GILPS
General Inductive Logic Programming System
Language:Prolog
bio-ontology-research-group/lodvectors
Language:CSS14 1
bio-ontology-research-group/medread
12 0
bio-ontology-research-group/oboconsistencytest
Language:Groovy12 2
bio-ontology-research-group/phenome2vec
Learning representation for classes in PhenomeNet Ontology
bio-ontology-research-group/phenosim
Language:Groovy
bio-ontology-research-group/rulemin
Language:Python11 01
bio-ontology-research-group/word2vec
Language:C11 01