biocorecrg/master_of_pores

Issues

• Help with configuring the "global" config file to use resources in my cluster

  #117 opened 3 months ago by SabeenRaza75
  0

• base calling error

  #116 opened a year ago by oohas2000
  0

• Can't select genome instead of transcriptome

  #115 opened a year ago by melispyilmaz
  0

• Discrepancy between coverage between Bam file and epinano/tombo site output?

  #114 opened a year ago by smk5g5
  0

• Fail to install

  #113 opened 2 years ago by AndreaYCT
  0

• NanoPreProcess is successfully running but it's not giving me a clear output?

  #112 opened 2 years ago by rober136
  1

• Awk command in basecalling process

  #72 opened 2 years ago by ADelgadoT
  3

• #QUESTION: to detect m6A RNA modifications

  #89 opened 2 years ago by hqs10
  3

• Issue with NanoMod

  #103 opened 2 years ago by Maheen94
  3

• problem with NanoPreprocess

  #101 opened 2 years ago by MSajek
  2

• Counts feature error during Nanopreprocess run

  #97 opened 2 years ago by Maheen94
  21

• The "nanopreprocess.nf" exits with an error, as the guppy_basecaller 6.0.1 outputs fastq files in subdirectories "pass" and "fail".

  #111 opened 2 years ago by sbridgett
  2

• Newer guppy versions dont seem to have fast5_type.py

  #110 opened 3 years ago by xguse
  2

• help interpreting why logBaseCalling might be failing

  #109 opened 3 years ago by xguse
  10

• terraform: I have existing vpc/security group values that I want this instance to use

  #108 opened 3 years ago by xguse
  4

• Copying ami-0bf3a9a6cb7a5ea9f to US-East Virginia?

  #107 opened 3 years ago by xguse
  3

• Guppy

  #105 opened 3 years ago by amol007-123
  3

• Guppy_basecaller issue

  #106 opened 3 years ago by amol007-123
  1

• Error starting Nanopreprocess - >logbasecalling

  #104 opened 3 years ago by agamblindr
  4

• update deeplexicon to latest version which allows running in GPU (option -g)

  #67 opened 3 years ago by enovoa
  1

• join_results from NanoTail fails

  #78 opened 3 years ago by NuriaDiaz
  15

• Error during NanoPreprocess step

  #96 opened 3 years ago by chad388
  1

• Nanomod after Nanoporprocess_simple runs with no modules except "index_reference"

  #102 opened 3 years ago by AnunayS
  3

• Zero Division Error

  #95 opened 3 years ago by koushikmuralidharan
  9

• Questions regarding to proper use

  #84 opened 3 years ago by vgori
  1

• NanoPreprocess error (error exit status 127)

  #82 opened 3 years ago by andrew-d-l-nelson
  11

• Nanopreprocess error

  #79 opened 3 years ago by carlshotwell
  4

• Tailfindr slow

  #66 opened 3 years ago by guillaume-vares
  1

• unexpected BAM file is only 1KB with a successful run

  #94 opened 3 years ago by AhmedMohamed1993
  3

• CUDA error in NanoPreprocess

  #77 opened 4 years ago by albertoriva
  6

• Could not install albacore

  #93 opened 4 years ago by manburst
  20

• master of pores QC fail

  #90 opened 4 years ago by LubosBauer
  2

• NanoCount: error: unrecognized arguments: NanoCount

  #92 opened 4 years ago by clsgithubusr
  3

• Problems in starting the NanoPreprocess

  #87 opened 4 years ago by hqs10
  16

• NanoMod fail at beginning

  #65 opened 4 years ago by callumparr
  4

• How to install extra apt packages easily in biocorecrg-mopbasecall

  #91 opened 4 years ago by eylenth
  21

• fastqc not found Nanopreprocess

  #74 opened 4 years ago by samir-watson
  9

• NanoMod issues: Stops at index_reference

  #88 opened 4 years ago by hqs10
  7

• problem with Nanomod

  #76 opened 4 years ago by yasukoh
  40

• 09chxj/

  #86 opened 4 years ago by almreis
  0

• cxcccxc--pπP:?"…

  #85 opened 4 years ago by almreis
  0

• run with PBS cluster error

  #81 opened 4 years ago by pl618
  4

• Debian Med eager to complete Nanopore infrastructure

  #80 opened 4 years ago by smoe
  1

• Problem with the Nanomod pipeline

  #75 opened 4 years ago by lionelus
  3

• NanoMod - Process getModificationsWithTombo

  #73 opened 4 years ago by ADelgadoT
  1

• guppy basecalling error

  #71 opened 4 years ago by yasukoh
  1

• NanoMod after NanoPreprocessSimple

  #70 opened 4 years ago by yasukoh
  6

• deeplexicon in NanoPreproessSimple

  #69 opened 4 years ago by yasukoh
  17

• Record guppy version in module Nanopreprocess module

  #68 opened 4 years ago by ADelgadoT
  1

• New Tombo Output

  #64 opened 4 years ago by ADelgadoT
  2