Pinned Repositories
BOSS
A new algorithm for scaffolding
BRWMDI
BRWMDI is a computational method to identify potential microbe-disease interactions.
deepsignal
Detecting methylation using signal-level features from Nanopore sequencing reads
LoopPredictor
LoopPredictor: Predicting unknown enhancer-mediated genome topology by an ensemble machine learning model
MAC
Merging assemblies by using adjacency algebraic model and classification
MBiRW
MEC
Contig Misassembly Correction
MultiGuideScan
a multi-processing tool for designing CRISPR guide RNA library
MultiMotifMaker
A multi-thread tool for identifying DNA methylation motifs from Pacbio reads
SIMCLDA
Prediction of lncRNA-disease associations based on inductive matrix completion
bioinfomaticsCSU's Repositories
bioinfomaticsCSU/deepsignal
Detecting methylation using signal-level features from Nanopore sequencing reads
bioinfomaticsCSU/MAC
Merging assemblies by using adjacency algebraic model and classification
bioinfomaticsCSU/SIMCLDA
Prediction of lncRNA-disease associations based on inductive matrix completion
bioinfomaticsCSU/LoopPredictor
LoopPredictor: Predicting unknown enhancer-mediated genome topology by an ensemble machine learning model
bioinfomaticsCSU/BOSS
A new algorithm for scaffolding
bioinfomaticsCSU/MultiMotifMaker
A multi-thread tool for identifying DNA methylation motifs from Pacbio reads
bioinfomaticsCSU/BRWMDI
BRWMDI is a computational method to identify potential microbe-disease interactions.
bioinfomaticsCSU/MEC
Contig Misassembly Correction
bioinfomaticsCSU/MultiGuideScan
a multi-processing tool for designing CRISPR guide RNA library
bioinfomaticsCSU/SCOP
A novel scaffolding algorithm based on contig classification and optimization
bioinfomaticsCSU/DMFCDA
Deep matrix factorization improves prediction of human circRNA-disease associations
bioinfomaticsCSU/CMLDR
A novel drug repositioning computational method
bioinfomaticsCSU/iLSLS
A Novel Scaffolding Algorithm Based on Contig Error Correction and Path Extension
bioinfomaticsCSU/EPGA2
A New Assembler
bioinfomaticsCSU/GapReduce
Gap Filling Tool
bioinfomaticsCSU/GMCLDA
bioinfomaticsCSU/PESM
PESM: predicting the essentiality of miRNAs based on gradient boosting machines and sequences
bioinfomaticsCSU/RepAHR
bioinfomaticsCSU/REQUEST
REQUEST is a novel REad QUality Evaluation and Selection Tool (REQUEST) for evaluating the quality of third generation long reads.
bioinfomaticsCSU/ARC
Improving de novo assembly based on reads classification
bioinfomaticsCSU/bedtools2
bedtools - the swiss army knife for genome arithmetic
bioinfomaticsCSU/ChIAPoP
ChIAPoP: A integrated tool for ChIA-PET data analysis
bioinfomaticsCSU/CLRS
📚 Solutions to Introduction to Algorithms Third Edition
bioinfomaticsCSU/EPGA-SC
EPGA-SC : A framework for de novo assembly of single-cell sequencing reads
bioinfomaticsCSU/FitHiChIP
Statistically Significant loops from HiChIP data
bioinfomaticsCSU/GET
Gap-filling Evaluation Tool
bioinfomaticsCSU/igv
Integrative Genomics Viewer. Fast, efficient, scalable visualization tool for genomics data and annotations
bioinfomaticsCSU/NetL_DDI
bioinfomaticsCSU/PE-Trimmer
An efficient trimming algorithm based on multi-feature fusion scoring model for NGS data
bioinfomaticsCSU/pip
The Python package installer