Pinned Repositories
bmeg-etl
ETL configuration for BMEG
bmeg-site
cwl-go
deployment
BMEG site setup and deployment
funnel-client
Trigger the Google Genomics Pipeline API with CWL
grip
Graph Integration Platform
iceberg
A clearinghouse for schemas "There is seven-eighths of it underwater for every part that shows."
iceberg-schema-tools
Create and maintain central iceberg schema.
ophion
Language for making graph queries from data
sifter
ETL Platform for building JSON schema based data and property graphs
bmeg's Repositories
bmeg/ophion
Language for making graph queries from data
bmeg/bmeg.github.io
bmeg/gaia
Focal point for gathering and analyzing biomedical evidence as a graph
bmeg/gaia-bmeg
BMEG implementation project for Gaia
bmeg/golib
Common utility functions for GO
bmeg/grip-viewer
bmeg/protograph
Transform a stream of messages into a graph
bmeg/py-gelnet
Cython wrapper for R gelnet ML library
bmeg/react-sidebar
A sidebar component for React
bmeg/schism
REST API for converting between genome builds
bmeg/analysis
bmeg/bmeg-ml
bmeg/bmeg-proxy
bmeg/bmeg_to_cytoscape
renders bmeg schema into cytoscape import files
bmeg/common-workflow-language
Repository for CWL Specifications. Use https://www.biostars.org/t/cwl/ for support.
bmeg/deploy-bmeg
bmeg/ga4gh-schemas
Models and APIs for Genomic data. FUTURE WORK DEPRECATED, DO NOT ADD COMMITS HERE.
bmeg/gdan-tmp-webdash
bmeg/go-swagger
Swagger 2.0 implementation for go
bmeg/grip_fhir
bmeg/grip_ga4gh_search
bmeg/griplab
bmeg/id_voter
bmeg/python-cwlgen
Generation of CWL programmatically. Available types: CommandLineTool and DockerRequirement
bmeg/ratify
validate all incoming messages
bmeg/react-json-view
JSON viewer for react
bmeg/schemas
schemas for biostream
bmeg/sifter-tools
bmeg/vise
bmeg/wiki
Extract to/from mediawiki