bowhan/piPipes

Issues

• Unable to download the human genome from igenome

  #37 opened 3 years ago by sayamsmr
  4

• install custom genome error

  #39 opened 2 years ago by ROund-code
  0

• piRNA plots python error

  #38 opened 2 years ago by rberrens
  0

• Error: unable to find or generate fasta for the genome

  #27 opened 7 years ago by Shirleyyyyyy
  1

• Error in which(x <= 10^floor(log10(x)) * nice)[[1]] : subscript out of bounds

  #36 opened 4 years ago by zhanglm07
  0

• piPipes_smallRNA_bed2_to_bw.sh: line 32: 73659 Segmentation fault

  #31 opened 7 years ago by YouCai626
  12

• piPipes

  #35 opened 5 years ago by LliliansCalvo
  0

• Error:mapping to rRNA failed / Could not locate a Bowtie index corresponding to basename "1"

  #34 opened 5 years ago by Coayala
  0

• Error: mapping to rRNA failed

  #18 opened 8 years ago by hemingwang
  4

• piPipes_smallRNA_bed2_to_bw.sh: line 32: 21799 Segmentation fault

  #33 opened 6 years ago by edridgedsouza
  1

• Include a modules file for cluster users

  #32 opened 6 years ago by edridgedsouza
  0

• Errors while installing R dependencies

  #7 opened 9 years ago by blaiseli
  8

• When installing genome, stuck in 'receiving incremental file list'

  #29 opened 7 years ago by avivdm
  0

• Segmentation Fault

  #28 opened 7 years ago by cellmem
  0

• sRNA single-sample mode alignment output

  #25 opened 7 years ago by malloryfreeberg
  0

• Problems with R packages(ggplot2?)

  #24 opened 7 years ago by tarcisiofbr
  3

• parameters in `/common/mm9/variables`

  #22 opened 8 years ago by dingailuma
  1

• biological replicates for smallRNA analysis

  #19 opened 8 years ago by bakerwm
  1

• Bug in piPipes_bed2_to_bedGraph

  #20 opened 8 years ago by yfu
  1

• problem with piPipes installation on OSx

  #15 opened 8 years ago by marinejpetit
  2

• Latest version of the genomes (danRer10)

  #17 opened 8 years ago by naluru
  1

• Error while installing 'feather'

  #16 opened 8 years ago by samrus98
  2

• Missing columns in *.transposon.sorted.unique.bigWig.summary

  #14 opened 8 years ago by blaiseli
  2

• gene_transposon_cluster_direct_mapping is absent from piPipes rna output

  #13 opened 9 years ago by blaiseli
  3

• Error in RCircos.Validate.Genomic.Data(genomic.data, plot.type)

  #12 opened 9 years ago by blaiseli
  0

• `bwtool` oom-killed but no obviously report by `piPipes chip`

  #8 opened 9 years ago by blaiseli
  3

• bigWig in binary code

  #10 opened 9 years ago by DannyBerg
  1

• TRANSGENE_MAPPING_DIR not set in piPipes_GenomeSeq.sh

  #11 opened 9 years ago by blaiseli
  1

• Strange name in piPipes chip2 example output

  #9 opened 9 years ago by blaiseli
  1

• terminate called after throwing an instance of 'std::length_error'

  #6 opened 9 years ago by dianalow
  1

• Errors when launching piPipes small RNA

  #4 opened 10 years ago by iandry-rabe
  1