cancerit/dockstore-cgpmap

Issues

• cram files as inputs

  #29 opened 8 months ago by Mousiekin
  0

• HG38 build for bwamem2 references

  #28 opened 9 months ago by Mousiekin
  0

• Is unaligning BAMs necessary?

  #27 opened 10 months ago by Mousiekin
  4

• cgpmap on singularity

  #25 opened 3 years ago by dominikglodzikhms
  0

• switch to nproc from /proc/cpus

  #23 opened 4 years ago by keiranmraine
  0

• Bulk of continer build will be removed

  #19 opened 5 years ago by keiranmraine
  1

• Mate pairs and RNEXT, PNEXT fields in the result bam file

  #17 opened 4 years ago by DominikGlodzik
  2

• Pre-release for fragment+readQC

  #8 opened 4 years ago by keiranmraine
  1

• Versions for Bio::DB::HTS upgrade

  #13 opened 4 years ago by keiranmraine
  1

• gperftools - fast malloc seems to have been lost

  #18 opened 4 years ago by keiranmraine
  1

• samtools error

  #21 opened 5 years ago by skdhanda
  3

• Looks like parameter file needs update past 2.0.3

  #20 opened 5 years ago by denis-yuen
  2

• no intro on how to use the group meta yaml file and the tool does not validate yaml properly

  #16 opened 6 years ago by byb121
  1

• Segmentation faults

  #14 opened 6 years ago by DominikGlodzik
  4

• seems a wrong comment

  #15 opened 6 years ago by byb121
  0

• Add cores option to top level script

  #11 opened 7 years ago by keiranmraine
  0

• alpine build

  #10 opened 7 years ago by keiranmraine
  1

• Update ref bundle

  #9 opened 7 years ago by keiranmraine
  1

• cgpBigWig bugfix

  #6 opened 7 years ago by keiranmraine
  1

• Add docs for CPU env variable

  #7 opened 7 years ago by keiranmraine
  0

• Add docs for PCAP-Threaded ENV vars

  #4 opened 8 years ago by keiranmraine
  1

• Add build badges

  #1 opened 8 years ago by keiranmraine
  1