Pinned Repositories
BioPlex
R-side access to PPI data from Gygi lab
BioPlexAnalysis
Applications and downstream analysis of BioPlex PPI data
computervision
Everything to get started with computer vision
docker-rstudio-server
A repository for RStudio Server containers, with the goal of providing multi-architecture (ARM64 and AMD64) images.
HarvardInovalonUserGuide
User guide for Harvard's Inovalon resources.
HuBMAPy
A package to query the HuBMAP Human Reference Atlas Ontology
MerfishData
Collection of public MERFISH datasets
nhanes-database
ontology-mapper
a tool for mapping free-text descriptions of entities to ontology terms
phonto
PHenome - PHenome ONTOlogy for NHANES
Core for Computational Biomedicine's Repositories
ccb-hms/docker-rstudio-server
A repository for RStudio Server containers, with the goal of providing multi-architecture (ARM64 and AMD64) images.
ccb-hms/docker-analytic-workbench
ccb-hms/CyCIFData
Collection of public CyCIF datasets
ccb-hms/designmatch_docker
A Docker containerized approach for a one-and-done R environment with Gurobi Optimizer and the design match package pre-installed.
ccb-hms/sphinx-tutorial
dummy files to illustrate how to use sphinx and readthedocs.io
ccb-hms/BiocChallenges
Challenges for the Biocoductor community.
ccb-hms/BioPlexSplicing
Repo that contains analysis of splicing from RNAseq data for HEK293T/HCT116 cell lines
ccb-hms/docker-r-command-line
A repository for multi-arch (AMD64 / ARM64) command-line R containers accessible via ssh
ccb-hms/docker-ubuntu-interactive
A repository for Ubuntu containers tooled for interactive login with s6 supervisor, with the goal of providing multi-architecture (ARM64 and AMD64) images.
ccb-hms/EndothelialAtlasDocker
Docker container for EndothelialAtlas analysis
ccb-hms/expressionviewer
ccb-hms/graphframes
R Interface for GraphFrames
ccb-hms/GraphViewer
Flexible inspection of experimental data and metadata for nodes and edges of a graph
ccb-hms/smores-ontology-reasoner
ccb-hms/SpatialData
Collection of public spatial transcriptomics datasets
ccb-hms/styleguide
Style guides for Google-originated open-source projects