chao1224

ChatDrug

LLM for Drug Editing, ICLR 2024

Geom3D

Geom3D: Geometric Modeling on 3D Structures, NeurIPS 2023

GeoSSL

GeoSSL: Molecular Geometry Pretraining with SE(3)-Invariant Denoising Distance Matching, ICLR'23 (https://openreview.net/forum?id=CjTHVo1dvR)

GraphMVP

Pre-training Molecular Graph Representation with 3D Geometry, ICLR'22 (https://openreview.net/forum?id=xQUe1pOKPam)

Loss-Balanced-Task-Weighting

Loss-Balanced Task Weighting to Reduce Negative Transfer in Multi-Task Learning, AAAI-SA'19

MoleculeSDE

A Group Symmetric Stochastic Differential Equation Model for Molecule Multi-modal Pretraining, ICML'23

MoleculeSTM

Multi-modal Molecule Structure-text Model for Text-based Editing and Retrieval, Nat Mach Intell 2023 (https://www.nature.com/articles/s42256-023-00759-6)

n_gram_graph

N-Gram Graph: Simple Unsupervised Representation for Graphs, NeurIPS'19 (https://arxiv.org/abs/1806.09206)

NeuralMD

NeuralMD for protein-ligand binding simulation

ProteinDT

A Text-guided Protein Design Framework, Nat Mach Intell 2025 (https://www.nature.com/articles/s42256-025-01011-z)

chao1224/Loss-Balanced-Task-Weighting

Loss-Balanced Task Weighting to Reduce Negative Transfer in Multi-Task Learning, AAAI-SA'19

chao1224/AI-Terminology-page

The English-Chinese paired terminologies in Artificial Intelligence Domain

chao1224/Artificial-Intelligence-Terminology

The English-Chinese paired terminologies in Artificial Intelligence Domain

chao1224/awesome-deep-learning

A curated list of awesome Deep Learning tutorials, projects and communities.

chao1224/decagon

chao1224/bigdata_intro

chao1224/coursewebsite

Course website for Deep Learning and Applications

chao1224/densenet-pytorch

A PyTorch Implementation for Densely Connected Convolutional Networks (DenseNets)

chao1224/efficient_densenet_pytorch

A memory-efficient implementation of DenseNets

chao1224/einops

Deep learning operations reinvented (for pytorch, tensorflow, chainer, gluon and others)

chao1224/examples

A set of examples around pytorch in Vision, Text, Reinforcement Learning, etc.

chao1224/GAT

Graph Attention Networks (https://arxiv.org/abs/1710.10903)

chao1224/graph-generation

GraphRNN: Generating Realistic Graphs with Deep Auto-regressive Models

chao1224/imagenet

Pytorch Imagenet Models Example + Transfer Learning (and fine-tuning)

chao1224/imagenet-fast

chao1224/lsc

Large-scale comparison of machine learning methods for drug target prediction on ChEMBL

chao1224/pandoc-journal-templates

Pandoc templates and resources for the major (bio)statistics journals

chao1224/py-upset

A pure-python implementation of the UpSet suite of visualisation methods by Lex, Gehlenborg et al.

chao1224/pygcn

Graph Convolutional Networks in PyTorch

chao1224/pytorch-cifar

95.16% on CIFAR10 with PyTorch

chao1224/pytorch-summary

Model summary in PyTorch similar to `model.summary()` in Keras

chao1224/pytorch_distributed_nn

implement distributed neural network and straggler kill in Pytorch

chao1224/pytorch_geometric

Geometric Deep Learning Extension Library for PyTorch

chao1224/pytorch_resnet_cifar10

Proper implementation of ResNet-s for CIFAR10/100 in pytorch that matches description in original paper.

chao1224/quantization_coding

chao1224/ResNeXt-DenseNet

PyTorch Implementation for ResNet, Pre-Activation ResNet, ResNeXt and DenseNet

chao1224/some_demo

chao1224/TF-Pytorch-comparison

comparison of performances between Tensorflow and Pytorch

chao1224/tiny_imagenet

TensorFlow Deep CNN for Tiny ImageNet Problem

chao1224/vision

Datasets, Transforms and Models specific to Computer Vision