chunfuxu

chunfuxu's Stars

• aymericdamien/TensorFlow-Examples

  TensorFlow Tutorial and Examples for Beginners (support TF v1 & v2)

  Language:Jupyter Notebook43.4k2k23314.9k

• trekhleb/homemade-machine-learning

  🤖 Python examples of popular machine learning algorithms with interactive Jupyter demos and math being explained

  Language:Jupyter Notebook23k936274.1k

• google-deepmind/deepmind-research

  This repository contains implementations and illustrative code to accompany DeepMind publications

  Language:Jupyter Notebook13.1k3253212.6k

• google-deepmind/alphafold

  Open source code for AlphaFold.

  Language:Python12.3k2208502.2k

• AUK9527/Are-u-ok

  8.8k901841.9k

• facebookresearch/esm

  Evolutionary Scale Modeling (esm): Pretrained language models for proteins

  Language:Python3.2k64320627

• sokrypton/ColabFold

  Making Protein folding accessible to all!

  Language:Jupyter Notebook1.9k46547480

• RosettaCommons/RFdiffusion

  Code for running RFdiffusion

  Language:Python1.7k40193325

• sokrypton/ColabDesign

  Making Protein Design accessible to all via Google Colab!

  Language:Python5612767130

• aqlaboratory/rgn

  Recurrent Geometric Networks for end-to-end differentiable learning of protein structure

  Language:Python326402887

• uw-ipd/RoseTTAFold2NA

  RoseTTAFold2 protein/nucleic acid complex prediction

  Language:Python3221610472

• jasonkyuyim/se3_diffusion

  Implementation for SE(3) diffusion model with application to protein backbone generation

  Language:Python316113451

• baaihealth/OpenComplex

  Trainable PyTorch framework for developing protein, RNA and complex models.

  Language:Python25817133

• gjoni/trRosetta

  A package to predict protein inter-residue geometries from sequence data

  Language:Python205111345

• brianhie/efficient-evolution

  Efficient evolution from protein language models

  Language:Python16762242

• HWaymentSteele/AF_Cluster

  Predict multiple protein conformations using sequence clustering and AlphaFold2.

  Language:Jupyter Notebook13041621

• jgreener64/mmterm

  View proteins and trajectories in the terminal

  Language:Python103438

• THUNLP-MT/dyMEAN

  This repo contains the codes for our paper "End-to-End Full-Atom Antibody Design"

  Language:Python926248

• deepmodeling/Uni-Fold

  Language:Python915118

• NREL/EvoProtGrad

  Directed evolution of proteins in sequence space with gradients

  Language:Jupyter Notebook60868

• huhlim/alphafold-multistate

  Language:Python295118

• hiranumn/LocalAccuracyPredictor

  Tensorflow/Python implementation of local accuracy predictor for proteins

  Language:Jupyter Notebook51111