common-workflow-lab/2020-covid-19-bh

AMBARISH's SOP-gatk-SARS-CoV-2

Closed this issue 4 years ago · 1 comments

mr-c commented 5 years ago

https://github.com/common-workflow-lab/2020-covid-19-bh/blob/master/SOP-gatk-SARS-CoV-2.md

needs a GATK4 version, GATK3 is not Free nor Open Source so we can't use it

ambarishK commented 5 years ago

I have updated the pipeline/workflow/protocol. Sir, check for the updates.
https://github.com/common-workflow-lab/2020-covid-19-bh/blob/master/SOP-GATK-SARS-CoV-2.md