Computational RNA Biology group

Around the world

Pinned Repositories

CHEUI
Concurrent identification of m6A and m5C modifications in individual molecules from nanopore sequencing
Language:C++33 13 422
ISOTOPE
ISOform-guided prediction of epiTOPEs in cancer
Language:Python14 5 56
METEORE
Automatic DNA methylation detection from nanopore tools and their consensus model
Language:R72 14 3318
MoSEA
Motif Scan and Enrichment Analysis (MoSEA)
Language:Python16 4 610
ORQAS
ORF Quantification pipeline for Alternative Splicing
Language:Python16 5 36
R2Dtool
Analyse RNA feature distributions.
Language:Jupyter Notebook14 5 34
radian
Nanopore direct RNA basecaller
Language:Python11 4 42
RATTLE
Reference-free reconstruction and error correction of transcriptomes from Nanopore long-read sequencing
Language:C++57 9 5510
riser
Biochemical-free enrichment or depletion of RNA classes in real-time during direct RNA sequencing
Language:Python11 4 24
SUPPA
SUPPA: Fast quantification of splicing and differential splicing
Language:Python262 14 18462

comprna/IG_Calculator
Set of scripts for obtaining Infomration Gain values from a set of features
Language:Java1 3 01