conmeehan

Associate Professor of Microbial Bioinformatics focussed on microbial phylodynamics/phylogenomics, primarily Mycobacteria, microbiomes and HIV/STIs.

Nottingham Trent UniversityNottingham, UK

Pinned Repositories

ggCaller
Bifrost graph gene caller.
Language:C++88 3 306
tb_variant_filter
A tool for filtering VCF files (relative to M. tuberculosis H37Rv)
Language:Python6 3 41
conmeehan.github.io
Language:SCSS0 0 10
gentax
Scripts for undertaking genomic taxonomy
Language:Python0 1 00
laymansHGVS
Program to take a HGVS variant and create a laymans sentence explaining what is occurring
Language:Python0 1 01
pathophy
Scripts for aiding in pathogen phylogenetics analysis
Language:Python3 3 03
teaching
Material for various lectures and workshops
0 1 00
TBProfiler
Profiling tool for Mycobacterium tuberculosis to detect ressistance and strain type from WGS data
Language:Python107 15 31543
tRAX
tRNA Analysis of eXpression
Language:Python9 6 285

conmeehan's Repositories

conmeehan/pathophy
Scripts for aiding in pathogen phylogenetics analysis
Language:Python3 3 03
conmeehan/conmeehan.github.io
Language:SCSS0 0 10
conmeehan/gentax
Scripts for undertaking genomic taxonomy
Language:Python0 1 00
conmeehan/laymansHGVS
Program to take a HGVS variant and create a laymans sentence explaining what is occurring
Language:Python0 1 01
conmeehan/teaching
Material for various lectures and workshops
0 1 00