Pinned Repositories
2018-10-32-test-uni
AssemblyByPacBio
Scripts to assign a barcode to a variable region from PacBio SMRT reads
BarNone
Match barcodes in sequencing data based on Levenshtein distance
containers
containers2
metarepo for tidying up container recipes, currently Singularity
fitseq
magnets_how_do_they_work
recombinator
rhesis2
website
slapchop
Barcode/amplicon sequencing bioinformatics tool, chops up FASTQ reads into capture groups using fuzzy regular expressions instead of base-positions. Very flexible, very parallelized, order now !
darachm's Repositories
darachm/containers
darachm/containers2
metarepo for tidying up container recipes, currently Singularity
darachm/fitseq
darachm/bioinfmunger
An example GitHub Action (CI) to build a Singularity container
darachm/bookwyrm-doi
Social reading and reviewing, decentralized with ActivityPub
darachm/dll-r
DLL2021 R workshop - info, slides, Rmd, notes
darachm/donor_gen
It makes donor plasmid cells from annotated gene fragments.
darachm/end-of-now
darachm/f1l-work
darachm/fake-headline
demo of misleading headline parsed
darachm/farbar
darachm/google-research
Google Research
darachm/guppy_parameter_optimiser
A small bash script that automates sweeping Guppy parameters in an attempt to optimise basecalling rate
darachm/itermae
darachm/jitsi-demo
darachm/massive-wiki-starter
Massive Wiki starter repository
darachm/mermaid-live-editor
Edit, preview and share mermaid charts/diagrams.
darachm/scratch
darachm/shared
darachm/singularity_bartender
Bartender v1.1, stuck in a Singularity container for bioinformatics pipelines
darachm/singularity_ncbi-blast
darachm/singularity_ncbi-entrez
darachm/sjhurling
darachm/stanford-hurling
darachm/starcode
All pairs search and sequence clustering
darachm/template-ghcr
darachm/testpage
darachm/ubuntu-2004
darachm/wbi-rss
darachm/workadventuretest