datapplab/pathview

Issues

• Pathview web server does not show the selected pathway

  #30 opened 4 months ago by emrahkirdok
  0

• Errors when using pathview with specific pathways

  #28 opened 2 years ago by nvelden
  2

• Failing to create PNGs from native KEGG pathways

  #29 opened a year ago by nbartonicek
  0

• Error in img[pidx[i, 3]:pidx[i, 4], sel.px, 1:3] : only 0's may be mixed with negative subscripts

  #26 opened 2 years ago by ErickMUO
  4

• No colorcode in the KEGG figure

  #22 opened 2 years ago by Elseedy28
  5

• Mapping KEGG drugs on KEGG pathways using pathview

  #25 opened 2 years ago by jordlang01
  1

• Request to Replace Sweave Vignettes with R Markdown

  #27 opened 2 years ago by sonali8434
  1

• Using pathview as an alternative to KEGG Mapper Reconstruct

  #12 opened 3 years ago by silvtal
  2

• Download of hsa04110 xml file failed!

  #15 opened 3 years ago by mewinners
  3

• Different colors for different samples in multi.state plots

  #18 opened 3 years ago by Coayala
  1

• paths.hsa lacks "Breast cancer" hsa05224 pathway

  #9 opened 3 years ago by mdozmorov
  2

• Issue with korg and newer species (almond)

  #10 opened 3 years ago by alexjacobsCDS
  2

• different limits and pre-defined '0' colour

  #1 opened 4 years ago by alimayy
  6

• round problem and legend

  #7 opened 3 years ago by ArthurPERE
  1

• Printing the Pathview Output on RMarkdown Document

  #20 opened 2 years ago by canholyavkin
  7

• Problems finding my organism in pathview

  #24 opened 2 years ago by hilariodc
  2

• Some pathway , eg carbon metabolism ko01200 does not return with fold change

  #19 opened 3 years ago by liuxianghui
  2

• Cannot output any pseudo colours

  #21 opened 2 years ago by LuoJulia
  0

• How to change the fonts?

  #23 opened 2 years ago by alhadjil
  0

• Different scores for the same gene in non-native plots

  #4 opened 2 years ago by leonorrib
  1

• Pathview fails with unhelpful error message when limit is set to two equal values

  #3 opened 2 years ago by lumotroph
  1

• Is there a way to save pathview results to a custom directory?

  #11 opened 2 years ago by eggrandio
  2

• pathview webserver down

  #6 opened 2 years ago by RMasteling
  1

• failed to download KEGG xml/png files

  #13 opened 2 years ago by javadnoorb
  8

• Download the pathway start with name "mapxxxxx"

  #17 opened 3 years ago by whiteorchid
  2

• Cannot map C00165 to rn0:04918 with pathview: 1.30.1

  #16 opened 3 years ago by iszhi
  0

• licensing/copyright question

  #8 opened 3 years ago by ivokwee
  3

• ask for help about the function of pathview

  #5 opened 4 years ago by sjtuyf
  4

• bug in mol.sum when there's single gene

  #2 opened 4 years ago by easygsea
  2