Pinned Repositories
spades
SPAdes Genome Assembler
BRC1_network
stringtie
Transcript assembly and quantification for RNA-Seq
SnapGeneFileReader
A Python project to read and write Snapgene *.dna into dict, json, and biopython object.
tidyplots
Tidy Plots for Scientific Papers
ComplexHeatmap
Make Complex Heatmaps
HMMRATAC
HMMRATAC peak caller for ATAC-seq data
MACS
MACS -- Model-based Analysis of ChIP-Seq
samtools
Tools (written in C using htslib) for manipulating next-generation sequencing data
how_are_we_stranded_here
Check strandedness of RNA-Seq fastq files