orthoevol-snakemake
A snakemake workflow for the OrthoEvol python package.
Authors
Usage
Simple
Install workflow
Clone the git repository and change to directory.
Configure workflow
Configure the workflow according to your needs via editing the file config.yaml
.
Execute workflow
Test your configuration by performing a dry-run via
[username@hostname]$ snakemake --use-conda -n
Execute the workflow locally via
[username@hostname]$ snakemake --use-conda --cores $N
Run a specific rule
[username@hostname]$ snakemake blastn --use-conda --cores $N