Pinned Repositories
anndata
Annotated data.
Basset
Convolutional neural network analysis for predicting DNA sequence activity.
CLIP-Seq
deep_learning_papers
A place to collect papers that are related to deep learning and computational biology
Glimmer-MG
Gene prediction in metagenomic sequences using Glimmer augmented by phylogenetic classification and clustering
Quake
Scimm
Sequence clustering with interpolated Markov models
scVI
Deep generative modeling for single-cell transcriptomics
torch-hdf5
Torch interface to HDF5 library
utility
Computational biology utility scripts
davek44's Repositories
davek44/Basset
Convolutional neural network analysis for predicting DNA sequence activity.
davek44/utility
Computational biology utility scripts
davek44/Glimmer-MG
Gene prediction in metagenomic sequences using Glimmer augmented by phylogenetic classification and clustering
davek44/deep_learning_papers
A place to collect papers that are related to deep learning and computational biology
davek44/Quake
davek44/Scimm
Sequence clustering with interpolated Markov models
davek44/CLIP-Seq
davek44/scVI
Deep generative modeling for single-cell transcriptomics
davek44/torch-hdf5
Torch interface to HDF5 library
davek44/anndata
Annotated data.
davek44/TEMPuRA
davek44/Kayak
Kayak is a library for automatic differentiation with applications to deep neural networks.
davek44/metrics
Torch metrics package
davek44/Spearmint
Spearmint Bayesian optimization codebase
davek44/tensorflow
Computation using data flow graphs for scalable machine learning