david4096
Open Source Bioinformatics - Scientific Computing for Medical Research
UC Santa Cruz Genomics Institute
Pinned Repositories
croissant-rdf
Tools for working with RDF from Croissant JSON-LD resources
dockstore
Our VM/Docker sharing infrastructure and management component
flask-auth0-example
Provides a boilerplate for securing your API using Auth0
ga4gh-node-gateway
An implementation of the GA4GH interface in node.js
metaset-explorer
datasets can be data too! 📡
rdf-embedder
schema-uml
Visualize (.avdl and .proto format) schema files as a UML diagram using Graphviz
umap-jsonl
Simple CLI to make plots of JSON Lines files
vss-dat-import
Clinvar data import for the Variant Subscription Service
david4096's Repositories
david4096/croissant-rdf
Tools for working with RDF from Croissant JSON-LD resources
david4096/awesome-quantum-software
Curated list of open-source quantum software projects.
david4096/biorxiv-finetuner
david4096/huggingface-rdf
Tools for generating RDF from Croissant JSON-LD resources
david4096/huggingface-rdf-paper
BioHackrXiv for BH Fukushima 2024 huggingface-rdf
david4096/quantum-examples
looking into quantum computing
david4096/metaset-explorer
datasets can be data too! 📡
david4096/23andMe-brca-exchange
Get expert, curated information about your 23andMe results in the BRCA1 and 2 regions
david4096/accent
AI-Assisted Curation/Content ENhancement Tool for Synapse
david4096/baudrill
david4096/croissant
Croissant is a high-level format for machine learning datasets that brings together four rich layers.
david4096/dbcls_llm
david4096/dockstore-notebooks
david4096/ga4gh-sdk
Generic SDK and CLI for GA4GH API services
david4096/galaxy-test
david4096/homebrew-camber-cli
david4096/huggingface-rdf-space
david4096/ipywidgets
Interactive Widgets for the Jupyter Notebook
david4096/jupyter-term
david4096/notebook-examples
david4096/octotools
OctoTools: An agentic framework with extensible tools for complex reasoning
david4096/on2vec
david4096/pycaret-use-case
Use cases for PyCaret
david4096/rag-workshop-amazon-bedrock-knowledge-bases
david4096/skater
david4096/smolly
david4096/tolq
david4096/UM_KEN4256_KnowledgeGraphs
Resources for the KG course at IDS, Maastricht University
david4096/wdl-bootcamp-jun24
david4096/windddd