dekkerlab/crane-nature-2015

Issues

• no

  #12 opened 4 years ago by BenxiaHu
  0

• how get TADs with a matrix from HiCPro?

  #9 opened 6 years ago by jacomegutierrez
  11

• The boundary strength was defined as the difference in the delta vector

  #11 opened 4 years ago by brainfo
  0

• how to calculate the insulation score for higher resolution Hi-C data

  #10 opened 6 years ago by yhx-tj
  1

• different insulation scores between *.insulation file and *.insulation.boundaries file

  #6 opened 7 years ago by YusenYe
  2

• how to create the input matrix?

  #7 opened 6 years ago by francisfa
  2

• an error in the usage

  #8 opened 6 years ago by lixiaoms
  0

• Some boundaries are local maximum of insulation score profile instead of local minimum

  #4 opened 7 years ago by yezhengSTAT
  2

• overlap between different boundaries

  #5 opened 7 years ago by min1992
  1

• how to use insulation score to identify TAD domains

  #3 opened 7 years ago by skytguuu
  3

• matrix interactions too large - cannot handle in memory

  #2 opened 9 years ago by liz-is
  2

• Input matrix header / rownames

  #1 opened 10 years ago by blmoore
  2