Pinned Repositories
civet
Cluster Investigation & Virus Epidemiology Tool
pangolin
Software package for assigning SARS-CoV-2 genome sequences to global lineages.
blastxml_parser
XSL stylesheets for parsing valid blastxml reports
civet
json-to-html-converter
Converts JSON data to HTML table with collapsible details view for nested objects.
nullarbor
:floppy_disk: :page_with_curl: "Reads to report" for public health and clinical microbiology
nullarbor-reads
Make an input file for nullarbor under diverse conditions.
pangolin
Software package for assigning SARS-CoV-2 genome sequences to global lineages.
twerp
Scripts and utilities for pathogen genomics and typing
xml_examples
Example xml files
delfair's Repositories
delfair/blastxml_parser
XSL stylesheets for parsing valid blastxml reports
delfair/civet
delfair/json-to-html-converter
Converts JSON data to HTML table with collapsible details view for nested objects.
delfair/nullarbor
:floppy_disk: :page_with_curl: "Reads to report" for public health and clinical microbiology
delfair/nullarbor-reads
Make an input file for nullarbor under diverse conditions.
delfair/pangolin
Software package for assigning SARS-CoV-2 genome sequences to global lineages.
delfair/twerp
Scripts and utilities for pathogen genomics and typing
delfair/xml_examples
Example xml files