dgelsin
Ph.D. - Extremophile and non-coding RNA biologist. Venturing into the gut microbiome with CRISPR as my guide.
Columbia UniversityNew York City, NY
Pinned Repositories
2015_macbook_pro
2015_macbook_pro_new
2018_Bacterial_Pipeline_riboseq
Ribosome profiling pipeline for bacterial samples created by Fuad Mohammad.
ArcPP
Archaeal Proteome Project
Cenote-Taker
Divergent Mobile Element Genome Annotation Pipeline
cmdb-bootcamp-homework
mRibo
Program for analyzing microbial ribosome profiling data
QBB_Puerto_Rico_2016
An introduction to bioinformatics and a tutorial on RNA-seq analysis in halophilic Archaea
Ribosome_profiling_MS
SHOxi_sRNA_MS
data and scripts for SHOxi manuscript
dgelsin's Repositories
dgelsin/mRibo
Program for analyzing microbial ribosome profiling data
dgelsin/Ribosome_profiling_MS
dgelsin/QBB_Puerto_Rico_2016
An introduction to bioinformatics and a tutorial on RNA-seq analysis in halophilic Archaea
dgelsin/2018_Bacterial_Pipeline_riboseq
Ribosome profiling pipeline for bacterial samples created by Fuad Mohammad.
dgelsin/ArcPP
Archaeal Proteome Project
dgelsin/Cenote-Taker
Divergent Mobile Element Genome Annotation Pipeline
dgelsin/SHOxi_sRNA_MS
data and scripts for SHOxi manuscript
dgelsin/2015_macbook_pro
dgelsin/2015_macbook_pro_new
dgelsin/cmdb-bootcamp-homework
dgelsin/courses
Course materials for the Data Science Specialization: https://www.coursera.org/specialization/jhudatascience/1
dgelsin/dgelsin.github.io
dgelsin/grabseqs
A utility for easy downloading of reads from next-gen sequencing repositories like NCBI SRA
dgelsin/isb_course_2020
Materials and tutorials for the 2020 ISB Microbiome Course
dgelsin/linuxbrew
:penguin: A fork of Homebrew for Linux
dgelsin/mac-dev-playbook
Basic web and app developer Mac setup in Ansible playbooks.
dgelsin/metaWRAP
A comprehensive pipeline for metagenomic analysis
dgelsin/poretools
a toolkit for working with Oxford nanopore data
dgelsin/Rotation4_Taylor_Lab_Spring2015
Scripts & Natural Selection Data on Human Regulatory Elements
dgelsin/Rotation_Taylor_Lab_Spring_2015
Scripts & Natural Selection Data on Human Regulatory Elements for my Rotation with Dr. James Taylor
dgelsin/scikit-ribo
Accurate estimation and robust modelling of translation dynamics at codon resolution
dgelsin/SnapT
Small ncRNA annotation pipeline for transcriptomics
dgelsin/srna_metatranscriptome_paper
Scripts and data for performing the analysis for the metatranscriptome sRNA discovery manuscript