Pinned Repositories
bioc2016singlecell
Bioconductor workshop: Analysis of single-cell RNA-seq data with R and Bioconductor
EDASeq
Clone of the Bioconductor repository for the EDASeq package, see https://bioconductor.org/packages/devel/bioc/html/EDASeq.html for the official development version.
learn2count
Structure learning based for zero-inflated negative binomial data
peixoto2015_tutorial
Tutorial to reproduce the analysis of Peixoto et al. (2015)
RUVSeq
Clone of the Bioconductor repository for the RUVSeq package, see https://bioconductor.org/packages/devel/bioc/html/RUVSeq.html for the official development version.
SingleCellExperiment
Clone of the Bioconductor repository for the SingleCellExperiment package, see https://bioconductor.org/packages/devel/bioc/html/SingleCellExperiment.html for the official development version.
ThrivingInBioinformatics
zinbwave
Clone of the Bioconductor repository for the zinbwave package, see https://bioconductor.org/packages/zinbwave
clusterExperiment
R package of techniques for comparing clusterings of single-cell sequencing data
scone
drisso's Repositories
drisso/SingleCellExperiment
Clone of the Bioconductor repository for the SingleCellExperiment package, see https://bioconductor.org/packages/devel/bioc/html/SingleCellExperiment.html for the official development version.
drisso/zinbwave
Clone of the Bioconductor repository for the zinbwave package, see https://bioconductor.org/packages/zinbwave
drisso/RUVSeq
Clone of the Bioconductor repository for the RUVSeq package, see https://bioconductor.org/packages/devel/bioc/html/RUVSeq.html for the official development version.
drisso/learn2count
Structure learning based for zero-inflated negative binomial data
drisso/ThrivingInBioinformatics
drisso/zinb_analysis
Data analysis and simulations for the ZINB-WaVE paper
drisso/mbkmeans
K-means clustering for large single-cell datasets
drisso/EDASeq
Clone of the Bioconductor repository for the EDASeq package, see https://bioconductor.org/packages/devel/bioc/html/EDASeq.html for the official development version.
drisso/awst
Asymmetric Winsorization per Sample Transformation
drisso/awst_analysis
Code to reproduce the analyses of the AWST paper
drisso/scRNAseq
Clone of the Bioconductor repository for the scRNAseq package.
drisso/CSAMA
Course material for CSAMA: Statistical Data Analysis for Genome Scale Biology
drisso/structure_learning
Code to reproduce the analyses of Hue Nguyen et al. (2020)
drisso/bioc_coc_multilingual
Multilingual version of the Bioconductor Code of Conduct
drisso/Bioconductor20YearsSlides
Carousel of xaringan slides to celebrate 20 years of the Bioconductor project.
drisso/BiocStickers
Stickers for some Bioconductor packages - feel free to contribute and/or modify.
drisso/czi_demo
CZI demo: Large-scale clustering in Bioconductor
drisso/EuroBioC2023
drisso/ISCB.Course
Bioconductor course at ISCB44
drisso/ISMB.OSCA
drisso/large-scale-data-base
Base Rmd files for Orchestrating Large-Scale Data Analysis in Bioconducotr
drisso/miniBiocWorkshop
A mini-workshop for debugging purposes
drisso/my_workshop
drisso/NewWave-script
Code used for NewWave article
drisso/proteomics_course
drisso/PsiNorm
psinorm
drisso/renku-project-template
Custom project template for Renku that uses Bioconductor docker images
drisso/ridge
drisso/scalablePCA
testing
drisso/whitePaper
Manubot for white paper