drisso/RUVSeq

Issues

• Plot gene expression after edgeR DE analysis

  #13 opened a year ago by lucolotto
  0

• I need some help please

  #12 opened a year ago by beginner984
  3

• Normalized expression set for GSVA

  #11 opened 2 years ago by dzjfeel
  0

• RUVg using positive control genes (ERCC mix 1 & mix 2)

  #10 opened 3 years ago by mariana19901990
  0

• using RUVg on ERRC spike ins for DE analysis where we expect a global amplification of transcription in one group

  #9 opened 3 years ago by LouellaVasquez33
  1

• RUVs batch correction question

  #7 opened 3 years ago by gianfilippo
  2

• How to get the ERCCs-adjusted CPM value after RUVg

  #6 opened 3 years ago by zhouqz
  6

• Need guidance for uneven samples

  #8 opened 3 years ago by devenderarora
  1

• How to choose the normalization process with RUVg

  #3 opened 3 years ago by fatyang799
  1

• installation error

  #4 opened 3 years ago by lizhaozhi
  1

• How to decide the the number of factors of unwanted variation to be estimated from the data.

  #5 opened 4 years ago by lizhaozhi
  1

• generating bedgraphs using RUVseq normalisation

  #2 opened 4 years ago by ahorvath
  3

• featureData missing after running RUVg

  #1 opened 5 years ago by symbiologist
  0