Pinned Repositories
bootstrap_python_package
Bootstrap a python package with cookiecutter
genenetweaver
Python wrapper for GeneNetWeaver
interact
Implementation of the INtERAcT algorithm
paccmann
PaccMann training models
gt4sd-core
GT4SD, an open-source library to accelerate hypothesis generation in the scientific discovery process.
depiction
interpret deep learning models in a framework-independent fashion
mimkl
Matrix-Induced Multiple Kernel Learning
paccmann_kinase_binding_residues
Comparison of active site and full kinase sequences for drug-target affinity prediction and molecular generation. Full paper: https://pubs.acs.org/doi/10.1021/acs.jcim.1c00889
paccmann_rl
Code pipeline for the PaccMann^RL in iScience: https://www.cell.com/iscience/fulltext/S2589-0042(21)00237-6
rxn4chemistry
Python wrapper for the IBM RXN for Chemistry API
drugilsberg's Repositories
drugilsberg/paccmann
PaccMann training models
drugilsberg/interact
Implementation of the INtERAcT algorithm
drugilsberg/genenetweaver
Python wrapper for GeneNetWeaver
drugilsberg/bootstrap_python_package
Bootstrap a python package with cookiecutter
drugilsberg/chimaera
Implementation of the Chimaera algorithm
drugilsberg/docker-rdkit-ubuntu
A docker image containing a "lightweight" RDKit installation
drugilsberg/uniprot_fasta_parser
UniProt FASTA parser
drugilsberg/functional-cpp
Header library with some functional utils for C++
drugilsberg/tensorflow-estimator-serving
Example of how to use tensorflow serving with an estimator
drugilsberg/biomedical
Tools for curating biomedical training data for large-scale language modeling
drugilsberg/container-service-getting-started-wt
drugilsberg/data-tooling
How should we store and serve the dataset?
drugilsberg/datasets
🤗 The largest hub of ready-to-use NLP datasets for ML models with fast, easy-to-use and efficient data manipulation tools
drugilsberg/docker
Dockerfiles and configuration scripts for the Docker Hub Official Couchbase images
drugilsberg/drugilsberg.github.io
Personal web page
drugilsberg/esm
Evolutionary Scale Modeling (esm): Pretrained language models for proteins
drugilsberg/fvcore-master-for-textfusenet
fvcore master for TextFuseNet
drugilsberg/git-lfs
Git extension for versioning large files
drugilsberg/gt4sd-core
GT4SD, an open-source library to accelerate hypothesis generation in the scientific discovery process.
drugilsberg/histocartography
Histocartography is a framework bringing together AI and Digital Pathology
drugilsberg/instructlab
Command-line interface. Use this to chat with the model or train the model (training consumes the taxonomy data)
drugilsberg/Mastodon-Cheminformaticians
Most simple DIY webapp to bulk follow cheminformatics accounts on Mastodon. By Daniel Probst forked from David Adler, Thomas Haase & Hendrik Erz.
drugilsberg/mhdorientation
A repository cointaining a code to convert the orientation to the RAS space in .mhd files
drugilsberg/models
Models and examples built with TensorFlow
drugilsberg/paired-words-dnn-classifier
drugilsberg/paperscraper
Tools to scrape publication metadata from pubmed, arxiv, medrxiv and chemrxiv.
drugilsberg/phd_thesis_markdown
Template for writing a PhD thesis in Markdown
drugilsberg/promptsource
Toolkit for collecting and applying templates of prompting instances
drugilsberg/TextFuseNet
A PyTorch implementation of "TextFuseNet: Scene Text Detection with Richer Fused Features".
drugilsberg/transformers
🤗 Transformers: State-of-the-art Machine Learning for Pytorch, TensorFlow, and JAX.