Pinned Repositories
AMICI
Advanced Multilanguage Interface to CVODES and IDAS
AMICI
Advanced Multilanguage Interface to CVODES and IDAS
bionetgen
Rule-based modeling framework
fides-cpp
Trust region optimization in C++
isrene
Isotopologue reaction networks in Python
mia
Mass isotopolome analyzer - GUI-based non-targeted analysis of stable isotope labeling mass spectrometry data
sbmlmath
SBML MathML <-> SymPy
parPE
Parameter estimation for dynamical models using high-performance computing, batch and mini-batch optimizers, and dynamic load balancing.
pyPESTO
python Parameter EStimation TOolbox
PEtab
PEtab - an SBML and TSV based data format for parameter estimation problems in systems biology
dweindl's Repositories
dweindl/sbmlmath
SBML MathML <-> SymPy
dweindl/mia
Mass isotopolome analyzer - GUI-based non-targeted analysis of stable isotope labeling mass spectrometry data
dweindl/fides-cpp
Trust region optimization in C++
dweindl/isrene
Isotopologue reaction networks in Python
dweindl/AMICI
Advanced Multilanguage Interface to CVODES and IDAS
dweindl/bionetgen
Rule-based modeling framework
dweindl/Biosimulators_AMICI
AMICI biochemical network simulation program via BioSimulators-compliant command-line interface and Docker container
dweindl/breitenbach-cli
dweindl/cherrytree
cherrytree
dweindl/custom_ci_image_travis
Custom travis ci image for travis
dweindl/dweindl
dweindl/exhale
Automatic C++ library api documentation generation: breathe doxygen in and exhale it out.
dweindl/fides
Trust Region Optimization in Python
dweindl/git-and-friends
Slides for the CCM Coding Camp at ICB 11.12.2017
dweindl/hello-world
Hello world
dweindl/intellij-antimony
Antimony language support for IntelliJ Platform IDEs
dweindl/libpetab-python
Python package for working with PEtab files
dweindl/microblog
A microblogging web application written in Python and Flask that I developed as part of my Flask Mega-Tutorial series.
dweindl/minesweeper-jquery
dweindl/pandas
Flexible and powerful data analysis / manipulation library for Python, providing labeled data structures similar to R data.frame objects, statistical functions, and much more
dweindl/pyPESTO
python Parameter EStimation TOolbox
dweindl/pysb
Python framework for Systems Biology modeling
dweindl/staged-recipes
A place to submit conda recipes before they become fully fledged conda-forge feedstocks
dweindl/sundials
Official development repository for SUNDIALS - a SUite of Nonlinear and DIfferential/ALgebraic equation Solvers. Pull requests are welcome for bug fixes and minor changes.
dweindl/sympy
A computer algebra system written in pure Python