dzerbino/oases

Issues

• Velveth: does not seem to be in fastA format

  #22 opened 3 years ago by shankar2318
  1

• velvetg parameter

  #21 opened 5 years ago by Morteza-A
  0

• Missing documentation of `-ins_length` in oases help message

  #20 opened 6 years ago by winni2k
  0

• Definition of -ins_length2 option

  #19 opened 6 years ago by winni2k
  1

• oases_pipeline.py identation error

  #18 opened 6 years ago by elainfl
  6

• Loss of strand-specificity

  #17 opened 6 years ago by jrodnz
  2

• velvetg trying to allocate more than 2 PB of RAM!

  #12 opened 8 years ago by cladobranch
  11

• Word length 83 greater than max allowed value (64)

  #16 opened 7 years ago by haidudu
  1

• Behavior of oases with duplicate removal

  #15 opened 7 years ago by winni2k
  2

• Documentation clarification

  #14 opened 7 years ago by winni2k
  2

• Slow merge

  #3 opened 8 years ago by dzerbino
  3

• Bug in AMOS output

  #2 opened 8 years ago by dzerbino
  2

• oasis-velvet crashing with glibc error

  #11 opened 8 years ago by nickschurch
  2

• AssertionError: Oases failed at k = 25

  #10 opened 8 years ago by Peajee
  6

• glibc detected *** oases: double free or corruption (!prev)

  #8 opened 9 years ago by msbanos
  7

• Oases output depends on the order of the sequences to assemble in the input

  #9 opened 9 years ago by drosofff
  0

• oases pipeline with qsub.

  #7 opened 9 years ago by apallav
  0

• oases_pipeline.py: incorrect range in singleKAssemblies

  #5 opened 10 years ago by sammyjava
  2

• Add velvet repository as a sub-module

  #6 opened 10 years ago by tseemann
  2

• Typo in manual "-merge" => "-merge yes"

  #4 opened 11 years ago by tseemann
  1

• segfaults at free() in Oases in merge mode

  #1 opened 13 years ago by mhowison
  1