Can't install in R4.0.2

[pcantalupo]

Hello,
I tried the following to install dasper but got errors:

if (!requireNamespace("BiocManager", quietly = TRUE)) {
    install.packages("BiocManager")
}

BiocManager::install("dasper")

which gave me this error:

Warning message:
package ‘dasper’ is not available (for R version 4.0.2) 

Then I tried

BiocManager::install("dzhang32/dasper")

and got:

ERROR: dependency ‘megadepth’ is not available for package ‘dasper’
* removing ‘/Library/Frameworks/R.framework/Versions/4.0/Resources/library/dasper’
Error: Failed to install 'dasper' from GitHub:
  (converted from warning) installation of package ‘/var/folders/6b/fk6yw91n0gn9r5sr99yc88x5_r9zrk/T//Rtmp2WW3yy/file1165c7f39b482/dasper_1.1.6.tar.gz’ had non-zero exit status

I tried to install megadepth but got error that it is not available for R 4.0.2 BiocManager::install("megadepth")

Warning message:
package ‘megadepth’ is not available (for R version 4.0.2)

Not sure what to try next. Thank you

[dzhang32]

Hi @pcantalupo,

Sorry for the delay in response, I missed this somehow.

I believe this was due to a megadepth related issue that is now resolved. If I run BiocManager::install("dzhang32/dasper"), this currently installs successfully for me.

Let me know if you are still having issues.

Best,

David