splicing
There are 46 repositories under splicing topic.
HXM14/Image-Forgery-Detection-using-Deep-learning
Image Forgery Detection using Deep learning Graduation project
namtpham/casia1groundtruth
Groundtruth images of tampering dataset CASIA 1.0
nf-core/rnasplice
rnasplice is a bioinformatics pipeline for RNA-seq alternative splicing analysis
Kuanhao-Chao/splam
✂️ Deep learning-based splice site predictor that improves spliced alignments
dputhier/pygtftk
A python package and a set of shell commands to handle GTF files
gagneurlab/FRASER
FRASER - Find RAre Splicing Events in RNA-seq
gagneurlab/MMSplice_MTSplice
Tissue-specific variant effect predictions on splicing
CCICB/introme
Introme prioritises coding and noncoding splice-altering variants for clinical variant interpretation
dzhang32/dasper
Detecting Aberrant Splicing Events from RNA-sequencing data
dohlee/spliceai-pytorch
Implementation of SpliceAI, Illumina's deep neural network to predict variant effects on splicing, in PyTorch.
LBGC-CFB/SPiP
Splicing Prediction Pipeline
ylab-hi/ScanNeo2
Snakemake-based computational workflow for neoantigen prediction from diverse sources
vrmelo/SPLICE-q
SPLICE-q -- A Python tool for genome-wide SPLIcing Efficiency quantification from RNA-seq data.
gruber-sciencelab/MAPP
🗺️ MAPP is a computational method which enables identification of binding motifs for RNA-binding proteins that shape pre-mRNA processing under specific conditions.
GenomiqueENS/AsaruSim
10X single cell Nanopore reads simulation workflow. Complete documentation avialable at: https://GenomiqueENS.github.io/AsaruSim/
comprna/Junckey
Collection of scripts for computing PSI of junction clusters
bpucker/ncss2018
Genome-wide investigation of non-canonical splice sites
casanova-lab/BPHunter
Genome-wide detection of human variants that disrupt intronic branchpoints
esebesty/SplicingFactory
Splicing Diversity Analysis for Transcriptome Data
RajLabMSSM/leafcutter-pipeline
Differential splicing and visualisation pipeline for the Raj lab
yuhuihui2011/VaSP
Quantification and Visualization of Variations of Splicing in Population
jalwillcox/Calculate-PSI
A script used to calculate percent spliced-in (PSI) values from bulk RNA sequencing data.
quartiq/ai9
CLI tool using Bluetooth and Python to control the Signalfire AI-9 Fiber Fusion Splicer
remittor/wcpatcher
WCP - archives browsing accelerator for Total Commander
streaming-university/QoMEX23-demo
QoMEX'23 Demo Paper - Quality Upshifting with Auxiliary I-Frame Splicing
ashleymaeconard/time2splice
Method to identify temporal and sex-specific alternative splicing from multi-omic data, specifically RNA-seq + (CUT&RUN or ChIP-seq).
dzhang32/auto_splice
Docker image for running leafcutter and dasper
Kuanhao-Chao/splam-analysis-results
all the scripts to reproduce the results in the splam paper
limeng12/intron_order
A method to calculate intron splicing order
RajLabMSSM/STMN2-splicing
Analysis of cryptic splicing in the STMN2 locus across the NYGC ALS consortium
slipnitskaya/regulAS
regulAS: Bioinformatics Toolset for ML-assisted Integrative Analysis of Alternative Splicing Regulome using RNA-Seq data
snbogan/Sp_RRBS_ATAC
Analyses combining ATAC-seq, RRBS, and RNA-seq data for purple urchins
Ven0maus/UnitySpriteSplicer
Slices a sprite into multiple square sprites, supports rotation and scaling
vidboda/ComputeDeltaESRSeq
A simple Perl script to compute DeltaESRSeq to predict exon skipping induced by exonic variants
ylaboratory/splitpea
A tool for calculating PPI network rewiring due to alternative splicing
scholl-lab/plasmicheck
Detect and quantify plasmid DNA contamination in sequencing data