ylab-hi/ScanNeo2

Issues

• Error happend!: Command 'regtools junctions extract -i 5 -I 10000000'

  #36 opened 18 days ago by androidpifu
  4

• How to cogfigure work environment

  #35 opened 18 days ago by androidpifu
  2

• Normal Sample

  #33 opened 23 days ago by LucaMannino
  3

• custom HLA

  #34 opened 23 days ago by LucaMannino
  2

• Can I run the pipeline with slurm on HPC?

  #26 opened 25 days ago by Xiao-Zhong
  21

• can i use targeted sequencing? rather than WES..

  #32 opened a month ago by ilovegreentea
  1

• Prevent trigger that re-runs certain rules (/tmp)

  #31 opened 2 months ago by riasc
  0

• Extracting RG for DNAseq data when input is BAM required

  #29 opened 3 months ago by riasc
  0

• MHC-I genotyping on Split BAMs

  #4 opened 8 months ago by riasc
  1

• cleave peptide for fusion gene

  #25 opened 3 months ago by nttg8100
  3

• Where I can download the required argument peptides

  #24 opened 3 months ago by nttg8100
  2

• Calling the long non indel from both DNAseq and RNAseq bam file

  #22 opened 3 months ago by nttg8100
  5

• Aligned option using star

  #21 opened 4 months ago by nttg8100
  2

• nthreads cannot be larger than environment variable

  #16 opened 4 months ago by riasc
  1

• add cpus to spladder

  #19 opened 4 months ago by nttg8100
  2

• Request TESLA*fastq.gz

  #18 opened 4 months ago by nine-sarayut
  3

• Paired-end Bam files causes error exception in featureCounts

  #17 opened 6 months ago by riasc
  2

• Add routine to catch missing input data on filesystem

  #14 opened 6 months ago by riasc
  0

• GATK Speedup Gather&Scatter

  #8 opened 6 months ago by riasc
  1

• Slow FTP download of VEP Cache

  #6 opened 8 months ago by riasc
  1