ecell

Pinned Repositories

dash-pathway
A Dash component for pathway visualization
Language:Python2 5 190
ecell3
Language:Python8 10 125
ecell4
An integrated software environment for multi-algorithm, multi-timescale, multi-spatial-representation simulation of various cellular phenomena
Language:Python18 8 649
ecell4_base
An integrated software environment for multi-algorithm, multi-timescale, multi-spatial-representation simulation of various cellular phenomena
Language:C++63 12 23223
ecell4_docs
The Sphinx source for https://ecell4.e-cell.org/
Language:Jupyter Notebook2 3 185
ECell_Dive
Language:C#3 4 00
ECell_Engine
Real-time simulation engine for biological systems
Language:C++2 4 01
scopyon
:microscope: Monte Carlo simulation toolkit for bioimaging systems
Language:Python7 14 94
spatiocyte
Language:C++3 12 22
transomics2cytoscape
Get and integrate the pathways to create a 3D transomics network visualization
Language:R5 9 30

ecell's Repositories

ecell/ecell-build
Language:Shell1 4 0
ecell/ecell3-model-editor
Language:Python1
ecell/lbcs-sphinx
Language:Python1 3 0
ecell/libmoleculizer
Language:C++11
ecell/moleculizer
Language:C++1
ecell/newio
Language:Python1
ecell/object_matrix_standalone
Language:C++1 1 00
ecell/ode
Language:C++1
ecell/pd_visualizer
Language:Python1
ecell/reaction_reader
Language:Python1
ecell/ecell3-ide
Language:C#
ecell/ecell4-cme
ecell/ecell4-ode
Language:C++
ecell/hdf5data