Pinned Repositories
atom-rst-preview
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CalBlitz
Blazing fast calcium imaging analysis toolbox
constrained-foopsi
Implementation of the constrained deconvolution spike inference algorithm in Matlab
constrained_foopsi_python
Python implementation of the constrained deconvolution algorithm
continuous_time_ca_sampler
The code takes as an input a time series vector of calcium observationsand produces samples from the posterior distribution of the underlying spike in continuous time.
epnev.github.io
SOURCE_EXTRACTION_PYTHON
Python implementation of the Constrained Non-negative Matrix Factorization algorithm for source extraction from calcium imaging recordings
CaImAn
Computational toolbox for large scale Calcium Imaging Analysis, including movie handling, motion correction, source extraction, spike deconvolution and result visualization.
CaImAn-MATLAB
Complete Matlab pipeline for large scale calcium imaging data analysis
NoRMCorre
Matlab routines for online non-rigid motion correction of calcium imaging data
epnev's Repositories
epnev/continuous_time_ca_sampler
The code takes as an input a time series vector of calcium observationsand produces samples from the posterior distribution of the underlying spike in continuous time.
epnev/constrained-foopsi
Implementation of the constrained deconvolution spike inference algorithm in Matlab
epnev/constrained_foopsi_python
Python implementation of the constrained deconvolution algorithm
epnev/CalBlitz
Blazing fast calcium imaging analysis toolbox
epnev/SOURCE_EXTRACTION_PYTHON
Python implementation of the Constrained Non-negative Matrix Factorization algorithm for source extraction from calcium imaging recordings
epnev/atom-rst-preview
Open a rendered version of the ReStructuredText in the current editor with `ctrl-shift-r`.
epnev/epnev.github.io
epnev/github-issue-templates
:symbols: A collection of GitHub issue and pull request templates
epnev/kymatio
Wavelet scattering transforms in Python with GPU acceleration
epnev/mountainsort_examples
Examples of using MountainSort spike sorting software.
epnev/ntc_CNMF
source separation
epnev/SPGL1_python_port
Port of SPGL1 to python