eviho

eviho's Stars

• constantAmateur/SoupX

  R package to quantify and remove cell free mRNAs from droplet based scRNA-seq data

  Language:R26337

• satijalab/seurat

  R toolkit for single cell genomics

  Language:R2.3k924

• AnnaSophieFroehlich/single_cell_aging

  analysis scripts for manuscript

  Language:Jupyter Notebook2

• BaderLab/HumanLiver

  R Data: Single cell RNA sequencing of human liver reveals distinct intrahepatic macrophage populations

  Language:R2711

• BaderLab/singleLiverCells

  Scripts for processing single liver cells RNA-Seq 10X Genomics Data

  Language:R2310

• NBISweden/excelerate-scRNAseq

  Single RNA-seq data analysis with R (Finland, May, 2019)

  Language:HTML218108

• jlmelville/uwot

  An R package implementing the UMAP dimensionality reduction method.

  Language:R32731

• aertslab/SCENIC

  SCENIC is an R package to infer Gene Regulatory Networks and cell types from single-cell RNA-seq data.

  Language:HTML42895

• LeidenCBC/MGC-SingleCellAnalysis2019

  Language:HTML21

• hemberg-lab/scRNA.seq.course

  Analysis of single cell RNA-seq data course

  Language:TeX673360

• seandavi/awesome-single-cell

  Community-curated list of software packages and data resources for single-cell, including RNA-seq, ATAC-seq, etc.

  3.3k995