Pinned Repositories
auto_process_ngs
Scripts and utilities for automatic processing & management of Illumina NGS sequencing data.
bedUtils
Some Python utilities for working with BED format files.
galaxy-tools
FLS Galaxy tools and tool-wrappers for in-house and third-party bioinformatic applications.
genomics
Scripts, utilities and programs for genomic bioinformatics.
GFFUtils
Python module and utility programs for working with GFF files
metagenomics
Scripts and utilities for running metagenomic analyses
pegs
PEGS: Peak-set Enrichment of Gene-Sets
proteomics-python2.7-proteomics-lib
A library supporting Proteomic data manipulation
RnaChipIntegrator
RnaChipIntegrator is a utility that performs integrated analyses of 'gene' data (a set of genes or other genomic features) with 'peak' data (a set of regions, for example ChIP peaks) to identify the genes nearest to each peak, and vice versa
SCRUM_single_cell_bioinformatics_workshop
This is a workshop to show step-by-step workflow of Single cell RNA-seq analysis
Bioinformatics Core Facility in the Faculty of Biology Medicine and Health at the University of Manchester's Repositories
fls-bioinformatics-core/genomics
Scripts, utilities and programs for genomic bioinformatics.
fls-bioinformatics-core/GFFUtils
Python module and utility programs for working with GFF files
fls-bioinformatics-core/galaxy-tools
FLS Galaxy tools and tool-wrappers for in-house and third-party bioinformatic applications.
fls-bioinformatics-core/auto_process_ngs
Scripts and utilities for automatic processing & management of Illumina NGS sequencing data.
fls-bioinformatics-core/metagenomics
Scripts and utilities for running metagenomic analyses
fls-bioinformatics-core/RnaChipIntegrator
RnaChipIntegrator is a utility that performs integrated analyses of 'gene' data (a set of genes or other genomic features) with 'peak' data (a set of regions, for example ChIP peaks) to identify the genes nearest to each peak, and vice versa
fls-bioinformatics-core/bedUtils
Some Python utilities for working with BED format files.
fls-bioinformatics-core/pegs
PEGS: Peak-set Enrichment of Gene-Sets
fls-bioinformatics-core/proteomics-python2.7-proteomics-lib
A library supporting Proteomic data manipulation
fls-bioinformatics-core/SCRUM_single_cell_bioinformatics_workshop
This is a workshop to show step-by-step workflow of Single cell RNA-seq analysis
fls-bioinformatics-core/fedora-rpms
Spec files and resources for building Fedora RPMS
fls-bioinformatics-core/HTS_SOLiD_Preprocessing
Archive of the SOLiD preprocessing scripts by Ariella Sasson & Todd Michael originally hosted at http://hts.rutgers.edu/filter
fls-bioinformatics-core/proteomics-mascot_log_reader
Software for interpreting Matrix Science Mascot log's
fls-bioinformatics-core/proteomics-perl5-proteomics-lib
A library supporting Proteomic data manipulation
fls-bioinformatics-core/fls-bioinformatics-core.github.io
fls-bioinformatics-core/NanoDam_analysis-sge
R markdowns & scripts accompanying 'Tang, J et al., 2021, bioRxiv'.
fls-bioinformatics-core/proteomics-mascot-user-contact-verify
Determines a valid list of users from Matrix Science's Mascot user.xml file, using an LDAP server