ga4gh-beacon/beacon-v2

Issues

• Conflicting `filteringTerms` definition in `genomicVariations`

  #159 opened 5 months ago by mbaudis
  3

• `filteringTerms`: Add `excluded` flag

  #63 opened 2 years ago by mbaudis
  21

• Updating "definitions" to "$defs" to comply with Json Schema 2020-12

  #173 opened 6 months ago by jrambla
  0

• Generalize ResultsetInstance

  #162 opened 7 months ago by redmitry
  3

• Overly complex response `meta` parameters should be optional

  #55 opened 2 years ago by mbaudis
  3

• meaningless entryTypeDefinition.aCollectionOf property defiition

  #114 opened a year ago by redmitry
  7

• Keeping or not the filteringTerms.yaml inside every entry type folder

  #94 opened 2 years ago by costero-e
  5

• Docs: broken link for implementation example

  #88 opened 2 years ago by mbaudis
  2

• Endpoint.singleEntryUrl must be "uri-template" not "uri"

  #103 opened 6 months ago by redmitry
  4

• Updating "definitions" (deprecated) to "$defs" in some Json schemas

  #153 opened 7 months ago by jrambla
  4

• Inconsistencies in `beaconMap` between entry types and paths (run, analysis)

  #125 opened a year ago by mbaudis
  7

• countResponse and booleanResponse not splitted per ResultSet

  #129 opened 10 months ago by costero-e
  7

• Invalid Syntax in `beaconErrorResponse.yaml`

  #135 opened 9 months ago by datsirul
  5

• Invalid Syntax in `includeResultsetResponses`

  #136 opened 9 months ago by datsirul
  4

• Invalid Syntax in `securityLevels`

  #137 opened 9 months ago by datsirul
  6

• Invalid Syntax in `/filtering_terms` response

  #138 opened 9 months ago by datsirul
  1

• Invalid `examples` syntax in the `filters` parameter

  #140 opened 9 months ago by datsirul
  4

• Example responses are missing required granularity values

  #139 opened 9 months ago by datsirul
  1

• Name conflict with `FilteringTerm` object definitions

  #156 opened 8 months ago by datsirul
  0

• Ambiguity in `oneOf` responses causing deserialization issues

  #154 opened 8 months ago by datsirul
  1

• Informational endpoint for variant parameters

  #97 opened 2 years ago by mbaudis
  2

• Document operational variant short form style?

  #158 opened 8 months ago by mbaudis
  0

• Request parameter `g_variant.end` should have a minimum of 1 value

  #130 opened 9 months ago by mbaudis
  2

• invalid CURIE example

  #111 opened 10 months ago by redmitry
  2

• filtering terms type for ontology filters

  #128 opened 10 months ago by tb143
  4

• Informational field for filtering terms

  #115 opened a year ago by mbaudis
  5

• In endpoints.yaml/.json for cohorts and datasets the /{id}/ request should be served by a `beaconCollectionsResponse` (or summary responses)

  #123 opened a year ago by mbaudis
  9

• Filtering across endpoint boundaries

  #78 opened a year ago by DavidCroftDKFZ
  6

• Invalid CollectionsResponse in the OpenAPI

  #116 opened a year ago by redmitry
  10

• filtering terms for alphanumeric filter

  #79 opened 2 years ago by gsfk
  9

• Ontology Resource object weird properties names

  #75 opened 2 years ago by redmitry
  4

• requests/filteringTerms.yaml too forgiving for request validation

  #56 opened 2 years ago by gsfk
  6

• Representing caseLevelData/zygosity with VRS alleles

  #57 opened 2 years ago by daisieh
  19

• phenotypicFeatures.evidence --- change from object to array of objects

  #69 opened 2 years ago by mrueda
  0

• genomicVariations to return pathogenicity predictions

  #76 opened 2 years ago by dglemos
  6

• Data use conditions and querying

  #84 opened 2 years ago by anuradhawick
  2

• Question: AND/OR combined filter logic

  #100 opened a year ago by reisingerf
  27

• Pagination to add total number of pages for a query

  #117 opened a year ago by costero-e
  2

• Invalid timeElement schema

  #112 opened a year ago by redmitry
  2

• remove entryType/filtering_terms endpoint(s)

  #104 opened 2 years ago by redmitry
  2

• ResultsOKResponse in collections (cohorts & datatypes)

  #98 opened 2 years ago by redmitry
  1

• pagination skip parameter

  #99 opened 2 years ago by redmitry
  2

• Making listing the filtering terms vs using filtering terms more homogeneous

  #96 opened 2 years ago by costero-e
  1

• Having multiscope in the filterTerm definition

  #95 opened 2 years ago by costero-e
  1

• Filtering terms in model: Confusing `/__entryType__/filteringTerms.json` files

  #93 opened 2 years ago by mbaudis
  8

• Change beaconFilterinTermsResults type to enum

  #77 opened 2 years ago by SergiAguilo
  3

• permissive complexValue schema

  #87 opened 2 years ago by redmitry
  2

• Verifier not accepting CUSTOM for HandoverType

  #83 opened 2 years ago by costero-e
  4

• invalid examples in disease.json

  #59 opened 2 years ago by redmitry
  1

• Explanation on ERD

  #80 opened 2 years ago by anuradhawick
  2